Novosphingobium sp. EMRT-2: FA702_02060
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Entry
FA702_02060 CDS
T06038
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor00010
Glycolysis / Gluconeogenesis
nor00020
Citrate cycle (TCA cycle)
nor00260
Glycine, serine and threonine metabolism
nor00280
Valine, leucine and isoleucine degradation
nor00310
Lysine degradation
nor00380
Tryptophan metabolism
nor00620
Pyruvate metabolism
nor00630
Glyoxylate and dicarboxylate metabolism
nor00640
Propanoate metabolism
nor00670
One carbon pool by folate
nor00785
Lipoic acid metabolism
nor01100
Metabolic pathways
nor01110
Biosynthesis of secondary metabolites
nor01120
Microbial metabolism in diverse environments
nor01200
Carbon metabolism
nor01210
2-Oxocarboxylic acid metabolism
nor01240
Biosynthesis of cofactors
Module
nor_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nor_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nor_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
nor_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FA702_02060 (lpdA)
00020 Citrate cycle (TCA cycle)
FA702_02060 (lpdA)
00620 Pyruvate metabolism
FA702_02060 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FA702_02060 (lpdA)
00640 Propanoate metabolism
FA702_02060 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FA702_02060 (lpdA)
00280 Valine, leucine and isoleucine degradation
FA702_02060 (lpdA)
00310 Lysine degradation
FA702_02060 (lpdA)
00380 Tryptophan metabolism
FA702_02060 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FA702_02060 (lpdA)
00670 One carbon pool by folate
FA702_02060 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nor04147
]
FA702_02060 (lpdA)
Enzymes [BR:
nor01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FA702_02060 (lpdA)
Exosome [BR:
nor04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FA702_02060 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_8
HI0933_like
AlaDh_PNT_C
Lys_Orn_oxgnase
2-Hacid_dh_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QCI92458
UniProt:
A0A4D7DCY2
LinkDB
All DBs
Position
388219..389631
Genome browser
AA seq
470 aa
AA seq
DB search
MAEQYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERELLGGICLNWGCIPTKALLRSAEVY
NHMKHAKAYGLAADNIRADIAAVVARSRGVAKQLNQGVTHLMKKNKITVHIGTGVLKAPG
TLEVTGDKGVETLTAKHIIVATGARARDLPFAKADGNRVWTYRHAMTPKEQPSKLLVIGS
GAIGIEFASFYNDMGTEVTVVEMMDRIVPVEDADVSAFLEKALVKQGMTILTGAGVESLD
VGASGVKAKIKGKDGKIVESQFSHVIVAVGIVPNTENIGLETLGVKAERGIIQIDGHGRT
NVKGVWAIGDVTPGPWLAHKASHEGVIAAEAIAQELGNKDVHPHAMDRGNIPGCTYCHPQ
IASVGLTEAKAKEAGYTLKVGTFPFIGNGKAIALGEPEGFVKTVFDAKTGELLGAHMIGA
EVTEMIQGYVVGKTLETTEAELMNTVFPHPTISESMHESVLAAYGRALHI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacagtatgacctgatcgtcctcggatccggccccggcggctatgtcgcggcc
atccgtgccgcgcaactcggcctcaagaccgccatcgtcgagcgcgagctgctgggcggc
atctgcctgaactggggatgcattcccaccaaggcgctgctgcgctcggccgaggtgtac
aaccacatgaagcacgccaaagcctatggtctcgcggcggacaacatccgcgccgacatc
gcggcggtggtcgcgcggtcgcgcggggtggccaagcagctcaaccagggcgtcacgcac
ctgatgaagaagaacaagatcaccgttcatataggcaccggcgtgctgaaggcgccgggc
acgctggaagtgaccggcgacaagggcgtggagacgctgaccgccaagcatatcatcgtc
gccacaggcgcgcgggcgcgtgatctgccgttcgccaaggccgacggcaaccgcgtgtgg
acctatcgccacgcgatgacgccgaaggaacagccgagcaagctgctggtcatcggctcg
ggcgcgatcggtatcgaattcgccagcttctacaacgacatgggcacggaagttacggtc
gtcgagatgatggaccggatcgtgccggtggaagacgccgacgtttccgccttcctcgaa
aaggcgctggtcaagcagggcatgacgatcctgaccggggcgggcgtcgaaagcctcgac
gtcggcgccagcggcgtgaaggcgaagatcaagggcaaggacggcaagatcgtcgaaagc
cagttcagccatgtcatcgtcgctgtgggcatcgtgcccaacaccgagaacatcggcctg
gaaacgctgggcgtgaaggccgaacgcgggatcatccagatcgatgggcatggccgcacc
aacgtgaagggcgtgtgggcgatcggcgatgtcactcccggcccgtggctggcgcacaag
gccagccacgaaggcgtgatcgcggcggaagccatcgcgcaggaactgggcaacaaggat
gtccatccgcacgccatggatcgcggcaacattccgggctgcacctattgccacccgcag
atcgccagcgttggcctgaccgaagccaaggcgaaggaagcgggttatacgctcaaggtc
ggcacgttcccgttcatcggcaacggcaaggcgatcgcgttgggcgagccggaaggcttc
gtgaagacggtgttcgacgccaagaccggcgaactgctgggcgcgcacatgatcggcgcg
gaagtgaccgagatgatccagggctacgtcgtcggcaagacgctggaaacgaccgaagcc
gaactgatgaacaccgtgttcccgcatccgacgatctcggaatcgatgcacgaaagcgtg
ctcgccgcctacggccgcgcgctgcacatctga
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