KEGG   Novosphingobium sp. EMRT-2: FA702_02060
Entry
FA702_02060       CDS       T06038                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nor  Novosphingobium sp. EMRT-2
Pathway
nor00010  Glycolysis / Gluconeogenesis
nor00020  Citrate cycle (TCA cycle)
nor00260  Glycine, serine and threonine metabolism
nor00280  Valine, leucine and isoleucine degradation
nor00310  Lysine degradation
nor00380  Tryptophan metabolism
nor00620  Pyruvate metabolism
nor00630  Glyoxylate and dicarboxylate metabolism
nor00640  Propanoate metabolism
nor00670  One carbon pool by folate
nor00785  Lipoic acid metabolism
nor01100  Metabolic pathways
nor01110  Biosynthesis of secondary metabolites
nor01120  Microbial metabolism in diverse environments
nor01200  Carbon metabolism
nor01210  2-Oxocarboxylic acid metabolism
nor01240  Biosynthesis of cofactors
Module
nor_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nor_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nor_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nor_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nor00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FA702_02060 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FA702_02060 (lpdA)
   00620 Pyruvate metabolism
    FA702_02060 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FA702_02060 (lpdA)
   00640 Propanoate metabolism
    FA702_02060 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FA702_02060 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FA702_02060 (lpdA)
   00310 Lysine degradation
    FA702_02060 (lpdA)
   00380 Tryptophan metabolism
    FA702_02060 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FA702_02060 (lpdA)
   00670 One carbon pool by folate
    FA702_02060 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nor04147]
    FA702_02060 (lpdA)
Enzymes [BR:nor01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FA702_02060 (lpdA)
Exosome [BR:nor04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FA702_02060 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 GIDA NAD_binding_8 HI0933_like AlaDh_PNT_C Lys_Orn_oxgnase 2-Hacid_dh_C 3HCDH_N
Other DBs
NCBI-ProteinID: QCI92458
UniProt: A0A4D7DCY2
LinkDB
Position
388219..389631
AA seq 470 aa
MAEQYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERELLGGICLNWGCIPTKALLRSAEVY
NHMKHAKAYGLAADNIRADIAAVVARSRGVAKQLNQGVTHLMKKNKITVHIGTGVLKAPG
TLEVTGDKGVETLTAKHIIVATGARARDLPFAKADGNRVWTYRHAMTPKEQPSKLLVIGS
GAIGIEFASFYNDMGTEVTVVEMMDRIVPVEDADVSAFLEKALVKQGMTILTGAGVESLD
VGASGVKAKIKGKDGKIVESQFSHVIVAVGIVPNTENIGLETLGVKAERGIIQIDGHGRT
NVKGVWAIGDVTPGPWLAHKASHEGVIAAEAIAQELGNKDVHPHAMDRGNIPGCTYCHPQ
IASVGLTEAKAKEAGYTLKVGTFPFIGNGKAIALGEPEGFVKTVFDAKTGELLGAHMIGA
EVTEMIQGYVVGKTLETTEAELMNTVFPHPTISESMHESVLAAYGRALHI
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggctgaacagtatgacctgatcgtcctcggatccggccccggcggctatgtcgcggcc
atccgtgccgcgcaactcggcctcaagaccgccatcgtcgagcgcgagctgctgggcggc
atctgcctgaactggggatgcattcccaccaaggcgctgctgcgctcggccgaggtgtac
aaccacatgaagcacgccaaagcctatggtctcgcggcggacaacatccgcgccgacatc
gcggcggtggtcgcgcggtcgcgcggggtggccaagcagctcaaccagggcgtcacgcac
ctgatgaagaagaacaagatcaccgttcatataggcaccggcgtgctgaaggcgccgggc
acgctggaagtgaccggcgacaagggcgtggagacgctgaccgccaagcatatcatcgtc
gccacaggcgcgcgggcgcgtgatctgccgttcgccaaggccgacggcaaccgcgtgtgg
acctatcgccacgcgatgacgccgaaggaacagccgagcaagctgctggtcatcggctcg
ggcgcgatcggtatcgaattcgccagcttctacaacgacatgggcacggaagttacggtc
gtcgagatgatggaccggatcgtgccggtggaagacgccgacgtttccgccttcctcgaa
aaggcgctggtcaagcagggcatgacgatcctgaccggggcgggcgtcgaaagcctcgac
gtcggcgccagcggcgtgaaggcgaagatcaagggcaaggacggcaagatcgtcgaaagc
cagttcagccatgtcatcgtcgctgtgggcatcgtgcccaacaccgagaacatcggcctg
gaaacgctgggcgtgaaggccgaacgcgggatcatccagatcgatgggcatggccgcacc
aacgtgaagggcgtgtgggcgatcggcgatgtcactcccggcccgtggctggcgcacaag
gccagccacgaaggcgtgatcgcggcggaagccatcgcgcaggaactgggcaacaaggat
gtccatccgcacgccatggatcgcggcaacattccgggctgcacctattgccacccgcag
atcgccagcgttggcctgaccgaagccaaggcgaaggaagcgggttatacgctcaaggtc
ggcacgttcccgttcatcggcaacggcaaggcgatcgcgttgggcgagccggaaggcttc
gtgaagacggtgttcgacgccaagaccggcgaactgctgggcgcgcacatgatcggcgcg
gaagtgaccgagatgatccagggctacgtcgtcggcaagacgctggaaacgaccgaagcc
gaactgatgaacaccgtgttcccgcatccgacgatctcggaatcgatgcacgaaagcgtg
ctcgccgcctacggccgcgcgctgcacatctga

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