KEGG   Novosphingobium sp. EMRT-2: FA702_04580
Entry
FA702_04580       CDS       T06038                                 
Name
(GenBank) conjugal transfer protein TraD
Organism
nor  Novosphingobium sp. EMRT-2
SSDB
Motif
Pfam: TrwB_AAD_bind TraG-D_C T4SS-DNA_transf AAA_16 AAA_19 FtsK_SpoIIIE AAA_11 AAA_22 GvpD_P-loop DUF87 Zeta_toxin SLFN-g3_helicase AAA_7 NTPase_1
Other DBs
NCBI-ProteinID: QCI92909
UniProt: A0A4D7DBN3
LinkDB
Position
complement(916819..918900)
AA seq 693 aa
MSIFRHDTLGSWTRGGQAIVHNVRMTTQVFYQTFLAGLVIWIGGIIWYALEKSSEYERFV
LVKLGQAAVMGDAVPGNVTPILFRTPAGKQYWTSPKALLDSGVAHKTLAAFETYLLHGAA
ISGLFALAMLGWAWFYFTRTGRGLGSNQFLRGARFGTVRQVRRALWRHAKGSFDIGGVNV
PDAFEPEHILICGAPGTGKTNIIVKMLDGIRKRKRRAIVYDTAGTFVEKFYRPGIDVLLN
PLDARADCWSPWVDVPRDYHYDQIAESTIPDKAGDPFWAKAARGTLVAVLRKLARQERTL
VSILLDTLLRSKLKDLAAFAVGTDAAAFISTEGERTSAGIQAELASVMRSFAYLDDTADG
FSIRDWVANEKDDSWLFITVKADQLPSLRPLITVWLDIAISAIMSMTPDRNRRLYCVIDE
LPTLQRLPSLGDFLARARKYGGCGILGFQSYPQLEATYGIQDAAAITGYCSTWVALRAND
TPTAKHVSENLGQVEQVEANEGMSYGVNDMRDGVNLSRMQVTRPLVMHTEVTNLPNLIGY
LRFGRSLPVVRFEDRYNKVASVAEAFEERGTPPVRLAVAVPPASPPSVTPATPARPKAGA
PKRRRTEPKAQEAELPLPSPSDEMGTSGGVPSAKSTPSTQSNGADERAPTSPPLELFGKP
AGFRLAGAPDLFLRLFKVPGRVAQRLELAAQTL
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgagcatctttcgtcacgacacgctcggctcctggacccgcggcggccaggccatcgtc
cacaacgtccgcatgaccacccaggtcttctaccagacctttcttgcggggctggtgatc
tggatcggcggcatcatctggtacgcgctcgaaaagtcgtccgagtacgagcgcttcgtt
cttgtgaagctcggccaggccgctgtcatgggggatgccgttcccggcaacgtcaccccg
atcctgttcaggacaccggcaggcaagcagtactggaccagcccgaaggcgctcctcgat
tccggtgtcgcccacaagacgctcgctgccttcgagacctatctgctccatggagcggca
atctccggcctgttcgccctcgccatgctggggtgggcctggttctacttcactcgcacc
ggacggggactcggctcgaaccagttcctgcgcggcgcgcggttcggaaccgtgcggcag
gttcgtcgcgccctgtggcgtcatgccaaggggagcttcgacattggcggtgtcaatgtc
cccgatgcgttcgagcccgagcacatcctgatctgcggcgcccccggcaccggcaagacc
aacatcatcgtcaagatgctcgacggaatccggaagcggaaacggcgggccatcgtttac
gatacggctggaaccttcgtcgaaaaattctatcggccggggatcgacgttctgctcaat
ccgctcgatgcgcgggcggattgctggtcgccctgggtcgatgtcccgcgggactatcac
tacgatcagatcgccgagtccacgattcccgacaaggccggcgatcccttctgggcgaag
gctgcgcgcggcacgctggttgccgtcttacggaagctggcccggcaggagcgcaccctg
gtctcgatcctgctcgacacgttattgcgctccaagctgaaggacctcgccgcgttcgct
gtcggtacagacgcggcggcattcatctcgacggagggggaacgcaccagcgccggcatc
caggccgagctcgcctcagtgatgcgcagcttcgcctatctcgatgacaccgcagacggt
ttctcgatccgcgactgggtcgccaatgagaaggacgacagctggctcttcatcactgta
aaggcggaccagcttccttcgctccgtcccctgatcacggtgtggcttgatatcgcgatc
agcgcgatcatgagcatgacgccggatcgcaaccgccgcctctattgcgtgatcgacgag
ttgccgacgctccagcgcctgccgtcgctcggcgacttccttgctcgcgcccggaagtat
ggcggctgcggcatcctggggttccagagctacccgcaattggaagcaacctatggcatc
caggatgccgccgcgatcaccggctactgctcgacctgggtggcgctgcgcgccaacgac
acgccgaccgcaaagcatgtcagcgagaatctggggcaggtcgaacaggtcgaagccaac
gagggcatgtcctacggcgtgaacgatatgcgcgatggtgtgaacctctcgcggatgcag
gtgacgcgacctctggtaatgcacaccgaggtcaccaatctgcccaacctcatcggctat
ctgcgcttcggacgcagcctgcctgtggtccggttcgaggaccgctataacaaggtcgcc
tccgtcgctgaggcgttcgaggagcgtggaacaccgcccgttcggctcgcggtcgcggtc
ccccctgcgtccccaccttcggtaactccggctacgccggccaggccaaaagcgggggca
cccaaacgacgccggacggagccgaaggcgcaagaggccgaactcccgcttccttcgcca
tcagacgagatgggaacatcgggtggcgtcccaagtgcaaaatccacgccatcgacgcaa
tcaaatggggccgatgaacgggcgcccacttcaccgccactcgaactgttcggcaagccc
gccgggttccgtcttgccggcgcgcccgatctgttcctgcgtcttttcaaggttccgggt
cgcgtcgcgcagcgccttgaactcgcggcccaaaccctttga

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