KEGG   Novosphingobium sp. EMRT-2: FA702_06065
Entry
FA702_06065       CDS       T06038                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
nor  Novosphingobium sp. EMRT-2
Pathway
nor02020  Two-component system
nor02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:nor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FA702_06065
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FA702_06065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nor03021]
    FA702_06065
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:nor02035]
    FA702_06065
Transcription machinery [BR:nor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FA702_06065
Bacterial motility proteins [BR:nor02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    FA702_06065
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 Rv2175c_wHTH UPF0122 PhyR_sigma-like
Other DBs
NCBI-ProteinID: QCI93159
LinkDB
Position
complement(1262629..1263360)
AA seq 243 aa
MKHDQRRFAAARAYRDDTADRIRRFLPMVRRLAWHIHGSGRAGMELEDLVQAGLVALTEC
AQKHSGPTEDGFAAYAKMRVRGAMVDLVRRVTPLSRSVSERRRMLADHTATLRNELGRDP
TDAELAAAMGLTDQELATLHAGSEPVRFETIDSAYSDSDPAFADDRPDSFALLADEQMRA
RVAFAIAALPERLQLVIQLYFVEELNLAEIAQVLDVSIPRVHQLKAQALEKLRAALGDEA
DIL
NT seq 732 nt   +upstreamnt  +downstreamnt
atgaaacatgatcaacgtcgatttgccgccgcgcgtgcctaccgtgacgataccgcggat
cgtatccgccggtttctgcccatggtccggcgcctggcgtggcatatccatgggtccggg
cgcgccggcatggaactggaagacctggtgcaggccgggctggttgctttgaccgaatgc
gcccagaagcactccggcccgacagaggacggctttgccgcctatgccaagatgcgcgtg
cgcggggccatggtcgatctggtgcgccgcgtgacgccgctttcgcgcagcgtgtccgaa
cggcgcaggatgctggccgatcataccgcgacgctgcgcaacgaactggggcgcgatccc
accgatgccgaactggccgccgccatgggcctgaccgaccaggaacttgccaccttgcac
gccgggagcgaaccagtgcgctttgaaacgatcgacagcgcctattccgatagcgatccg
gcctttgccgacgaccggcccgacagcttcgccttgctggccgacgaacagatgcgcgcg
cgggtggccttcgctatcgccgcgttgccggaaaggctccagctcgtgatccagctctac
ttcgtcgaggaactgaaccttgccgaaatcgcgcaggtgctcgacgtcagcattccccgc
gttcaccagctcaaggcgcaggcgctcgaaaagctgcgggccgcgctgggggatgaggcc
gacattctctga

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