Novosphingobium sp. EMRT-2: FA702_08545
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Entry
FA702_08545 CDS
T06038
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FA702_08545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nor03400
]
FA702_08545
Enzymes [BR:
nor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FA702_08545
DNA repair and recombination proteins [BR:
nor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FA702_08545
Prokaryotic type
FA702_08545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCI93602
LinkDB
All DBs
Position
1735074..1735754
Genome browser
AA seq
226 aa
AA seq
DB search
MATPLPDSWQPALAPVLATRPLRALGGFLSAEEAAGKVIFPPRGSRLRALELTPLEDVKV
VILGQDPYHGPGQAHGLSFSVPQGVKPPPSLVNIYKELESDLGLPRPSHGNLENWARQGV
LLLNNALTVEAGQAGSHAGKGWEDFTDAAVAAVAQRDVPTVFLLWGSHAQKKAARVQGLA
SGPHLVLKAPHPSPLSAHAGFFGCRHFSQANGFLEQHGRGAIDWRP
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccccttcccgatagctggcagccggcgctggcccctgttctcgccacccgc
ccgctgcgggcgctgggcggcttcctcagcgcggaagaggccgccggaaaggtgatcttt
ccgccgcgcggatcgcggttgcgcgcgctggaactgaccccgctggaggacgtgaaagtc
gttattctggggcaggacccctatcacggccccggccaggcgcacggcctttcgttttcg
gtgccgcaaggggtcaagccgccaccctcgctggtgaacatctacaaggaactggaatcc
gatctcggcctgccgcgcccgtcgcacggcaatctggaaaattgggcgcggcagggcgtg
ctgctgctgaacaacgcgctgacagtggaagccgggcaggccggatcgcacgccggcaaa
ggctgggaggatttcaccgacgcggcggtggccgccgtcgcgcagcgcgacgtgccaacc
gtcttcctgctgtggggcagccacgcgcagaagaaggcggcgcgggtgcagggccttgcc
agcggaccgcacctcgtcctgaaggcgccgcaccccagcccgctgtcggcacatgccggc
ttcttcggctgccgccatttcagccaggccaacggttttctcgaacagcacggccgcggc
gcgatcgactggcggccctga
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