Novosphingobium sp. EMRT-2: FA702_09675
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Entry
FA702_09675 CDS
T06038
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor00630
Glyoxylate and dicarboxylate metabolism
nor00680
Methane metabolism
nor01100
Metabolic pathways
nor01120
Microbial metabolism in diverse environments
nor01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FA702_09675
09102 Energy metabolism
00680 Methane metabolism
FA702_09675
Enzymes [BR:
nor01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
FA702_09675
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_10
Fer4_21
Fer4_9
Fer4_6
Fer4_8
Fer4_2
Fer4_15
Fer4_4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
QCI93805
UniProt:
A0A4D7DBW2
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All DBs
Position
1954970..1957822
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AA seq
950 aa
AA seq
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MGYERQADFGTPEVRSDTQVTCTIDGRAVTVPAGTTVMRAAALTGGAIPKLCATDNVKQF
GSCRMCLVEIDGMRGTPASCTTPVAEGMTVHTQTPRLQKLRKGVMELYISDHPLDCLTCS
ANNDCELQDTAAQVGLRDVRYGYAGENHLDQPADTSNPYFDFDPSKCIVCSRCVRACEEV
QGTFALTIDGRGFGSKVSAGLASDSFLSSECVSCGACVQACPTATLQEKAVKEIGKPERA
VVTTCAYCGVGCTFRAEMRGEQLVRMVPWKDGKANRGHSCVKGRFAWGYAQHQDRILKPM
IRASIDEPWREVSWEEALGHTARELKRIEEKYGRQALGGITSSRCTNEETFLVQKLIRAG
FGNNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVEDSDVILVIGANPTDGHPVFGSR
MKKRLRQGAKLIVIDPRRTDLVRSPHVTADYHLPLRPGTNVAVLTALAHVIVTEGLADEA
FVRERCDWDEYRHWADFVSDARHSPEFLEPVTGVPAEALRGAARLFATGGNGAIYYGLGV
TEHSQGSSTVMAIANLAMATGNIGRRGVGVNPLRGQNNVQGACDMGSFPHELSGYRHVSD
AGARALFEAEWGVKIDPEPGLRIPNMLDAATDGVFKALYIQGEDILQSDPDTKHVSAGLA
AMECVIVHDLFLNETANYAHVFLPGSSFLEKNGTFTNAERRIQPVRKVMEPLNGYEDWQV
TQELARAIGLDWNYTHPSEIMDEIARLTPTFSGVNYARLDAEGSLQWPVNAAAPDGSPIM
HVDGFVRGKGKFVVTDYVPTDERTGPRFPLLLTTGRILSHYNVGAQTRRTANVAWHPEDL
LEMHPTDAENRGVKSGDWVRLASRAGETTLRVTVTDRVAPGVVYTTFHHPATQANVVTTD
YSDWATNCPEYKVTAVQVTPSNGPTDWQEGYEELTRRSRRIEGSAMEAAE
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggttatgagcgtcaggccgatttcggcactccggaagtccgttccgacacgcaggtc
acctgcacgatcgacgggcgcgcggtaacggtgcccgccggcaccaccgtgatgcgcgcg
gcggcgctgaccggcggggccatccccaagctctgcgccaccgacaacgtcaagcagttc
ggctcgtgccggatgtgccttgtcgagatcgacgggatgcgcggcacgcccgcctcctgc
accacgcccgtggccgaagggatgaccgtccacacccagaccccgcgcctgcagaagctg
cgcaagggggtgatggaactctacatctccgaccacccgctcgattgcctgacctgcagc
gccaacaacgattgcgagttgcaggataccgccgcgcaagtgggcctgcgcgacgtgcgc
tatggctatgcgggcgagaaccacctcgatcagccggccgatacctccaacccctatttc
gatttcgatccgtcgaagtgcatcgtctgttcgcgctgcgtgcgcgcgtgcgaggaagtg
cagggcacctttgcgctgaccatcgacgggcgcggcttcggctcgaaagtctcggccggc
ctcgcctcggacagcttcctctcgtccgaatgcgtctcgtgcggagcctgcgtgcaggcc
tgcccgaccgcgaccttgcaggaaaaggcagtcaaggagatcggcaagcccgaacgcgcc
gtcgtcaccacctgcgcctattgcggggtgggctgcaccttccgcgccgagatgcgcggc
gaacagttggtgcgcatggtgccgtggaaggacggcaaggccaaccgcggccactcctgc
gtcaagggccgcttcgcctggggctatgcccagcaccaggaccgcattctcaagccgatg
atccgcgcgagcatcgacgaaccctggcgggaagtgagctgggaagaggcgcttggacac
accgcgcgcgaactgaagcggattgaggaaaagtacggccggcaggcgctgggcggcatc
acttccagccgctgcaccaacgaggagaccttcctcgtccagaagctgatccgcgccggc
ttcggcaacaacaacgtcgatacctgcgcgcgcgtctgccattcgcccaccggctatggc
ctgaagaccacgttcggcacctcggccggcacgcaggacttcgattcggtcgaggattcg
gacgtgatcctggtgatcggcgccaaccccaccgatgggcacccggtgttcggcagccgc
atgaagaagcggctgcgccagggcgccaagctgatcgtgatcgatccgcgccgcaccgat
ctggtgcgcagcccccatgtcacggcggactaccacctgccgctgcgccccggcaccaac
gtggcggtgctgaccgcgctcgcccacgtgatcgtcaccgaaggcctcgccgacgaagcc
ttcgtgcgcgaacgctgcgactgggacgaataccgccactgggccgatttcgtgtccgac
gcgcggcacagcccagaattcctcgaacctgtcaccggcgttcccgccgaagccttgcgc
ggcgcggcgcggctcttcgccacgggcggcaacggggccatttattacggcctgggcgtg
accgagcattcgcagggttcgtccaccgtcatggccatcgccaacctcgccatggccacg
ggcaacatcggccgtcgcggcgtgggcgtgaaccccctgcgcgggcagaacaacgtgcag
ggcgcctgcgacatgggcagcttcccgcacgagctgtcgggctatcgccatgtctccgat
gccggcgcgcgcgcgctgttcgaggccgaatggggcgtgaagatcgatcccgagccgggt
ctgcgcatccccaacatgctcgacgccgcgaccgacggcgtgttcaaggcgctctacatc
cagggcgaggacatcctccagtcggacccggatacgaagcacgtttcggccggcctcgcc
gcgatggaatgcgtgatcgtccacgacctgttcctcaacgagaccgccaactacgcccac
gtgttcctgccgggatcgagcttcctcgagaagaacggcacgttcaccaacgccgaacgc
cgcatccagccggtgcgcaaggtgatggaaccgctgaacgggtacgaggactggcaggtc
acgcaggaactggcgcgcgcgatcgggctggactggaactacacccatcccagcgagatc
atggacgagatcgcgcggctgacgccgacgttctccggcgtgaactatgcccggctcgat
gccgagggatcgctgcaatggccggtcaacgccgccgcccccgatggctcgccgatcatg
cacgttgatggcttcgtgcgcggcaagggcaagttcgtggtcaccgactacgtgcccacc
gacgagcgcaccggcccgcgcttcccgctgctgctgaccaccggccgcatcctctcgcac
tacaacgtcggcgcgcagacgcggcgcaccgccaatgtcgcgtggcatcccgaggacctg
ctcgaaatgcacccgaccgacgccgaaaaccggggcgtgaagtctggcgactgggtccgc
ctcgccagccgcgcgggcgagaccacgctgcgcgtgaccgtgaccgaccgcgtcgcgcct
ggtgtcgtctataccaccttccaccacccggcgacgcaggccaacgtcgtcaccaccgac
tattccgactgggccaccaactgccccgaatacaaggtcaccgccgtgcaggtcaccccc
agcaacggcccgaccgactggcaggagggctacgaggaactcacccgccgctcgcgccgg
atcgagggcagcgcgatggaggccgccgaatga
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