Novosphingobium sp. EMRT-2: FA702_09845
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Entry
FA702_09845 CDS
T06038
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nor
Novosphingobium sp. EMRT-2
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nor03009
]
FA702_09845 (rimO)
Enzymes [BR:
nor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FA702_09845 (rimO)
Ribosome biogenesis [BR:
nor03009
]
Prokaryotic type
ribosomal protein modification factors
FA702_09845 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QCI93831
UniProt:
A0A4D7DB64
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All DBs
Position
complement(1986812..1988206)
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AA seq
464 aa
AA seq
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MTSQNSPITLPEAPRVGMVSLGCPKALVDSERILTRLRADGYAMSADYAGADVVLVNTCG
FLDSAKEESLAAIGEAIAENGRVIVTGCMGNEAELIRAKFPDVLAVTGAHQYEAVVEAVH
EAAPPGMGPYIDLIPQALDDQGGIKLTPRHYSYLKISEGCNHACAFCIIPSLRGKLASRR
IDAVLREAEKLVAAGTKELLVISQDTSAYGVDVRHEERQWKGHPVRTHMTDLARELGQLR
TPQGETPWVRLHYVYPYPHVDAVIPLMAEGLVTPYLDIPFQHASPSVLRAMKRPANEAKV
LDRLKAWREVCPDIAIRSSFVVGFPGETEADFQYLLDWLDEAQLDRVGGFRFEPVDGASA
NHLPDPVPEEVKEERYARLMEKTEAISAAKLAAKVGRTIQVIVDEVGEPDEDGDLGATAR
SQADAPEIDGAVYLRNVPATLKPGDFAQVRIEDADAHDLYGVIA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccagaattcccccatcacgcttcccgaagcgccgcgcgtcggcatggtcagc
cttggctgccccaaggcgctggtcgattccgaacgcattctcacgcgcctgcgcgccgat
ggctatgccatgagcgcggactatgccggggcggacgtggtgctggtcaacacctgcggc
ttcctcgattcggccaaggaggaaagcctggccgcgatcggcgaggcgatcgccgagaac
ggccgcgtgatcgtgaccgggtgcatgggcaacgaggccgagctgatccgcgcgaagttc
cccgacgtgctggcggtaaccggcgcgcaccagtacgaggcggtggtggaagcggtgcac
gaagccgcgccgcccggcatggggccgtatatcgacctgatcccgcaggcgctggacgac
cagggcgggatcaagctgacgccgcgccattacagctacctcaagatttccgaaggctgc
aaccacgcctgcgcgttctgtatcatccccagcctgcgcggaaagctggccagccggcgc
atcgacgccgtgctgcgcgaggcggagaagctggtggcggcggggacgaaggaactgctg
gtcatcagccaggacacctcggcctatggcgtggacgtgcggcacgaggagcgccagtgg
aaggggcatcccgtgcgcacccacatgaccgatctggcgcgcgagctgggccagttgcgc
accccgcagggcgaaacgccatgggtgcgcctccattacgtgtacccttacccccatgtc
gacgcggtgatcccgctgatggccgaagggctggtgacgccctatctcgacatcccgttc
cagcacgccagccccagcgtgctgcgcgcgatgaagcggccggcgaatgaggccaaggtg
ctggacaggctgaaggcctggcgggaagtgtgccccgacatcgccatccggtcgagcttc
gtggtcggcttccccggcgagaccgaggcggatttccagtacctgctcgactggctggac
gaggcgcagctcgaccgtgtgggcggcttccgcttcgaaccggtggacggcgcgagcgcc
aaccacctgcccgatccggtgccggaggaggtcaaggaggaacgctacgcccgtctgatg
gaaaagaccgaggcgatcagcgcggccaagctcgccgccaaggtcggccgtacgatccag
gtgatcgtggacgaggtgggcgagccggacgaggacggcgatctgggcgcgaccgcgcgc
agccaggccgacgccccggaaatcgacggcgcggtctatctgcgcaacgtgcccgctacg
ttgaagccgggcgatttcgcgcaggtgcggatcgaggacgccgacgcgcacgacctctac
ggcgtgatcgcctga
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