Novosphingobium sp. EMRT-2: FA702_11120
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Entry
FA702_11120 CDS
T06038
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
nor
Novosphingobium sp. EMRT-2
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nor03032
]
FA702_11120
03036 Chromosome and associated proteins [BR:
nor03036
]
FA702_11120
03400 DNA repair and recombination proteins [BR:
nor03400
]
FA702_11120
DNA replication proteins [BR:
nor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FA702_11120
Chromosome and associated proteins [BR:
nor03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FA702_11120
DNA repair and recombination proteins [BR:
nor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FA702_11120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
ClpB_D2-small
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QCI94043
UniProt:
A0A4D7DC79
LinkDB
All DBs
Position
2257222..2257503
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AA seq
93 aa
AA seq
DB search
MIRSELLQELGRESPGLRAEEIERVVDVFFDEIAKRLAEGGRVELRGFGAFSTREREARK
GRNPRTGEAVDVPDKRVPYFKPGKEMRQRLNAD
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggtctgaattgctgcaggagctggggcgcgaaagccccggtctgcgtgccgag
gaaatcgagcgggtcgtcgacgtgtttttcgacgagatcgccaagcgccttgccgaaggc
ggccgcgtggaactgcgcggtttcggcgccttttccacgcgcgagcgcgaagcccgcaag
ggccgcaatccgcgcacgggcgaagcggtggacgtgccggacaagcgcgtgccctatttc
aagcccggcaaagaaatgcgccagcgccttaacgcggactga
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