Novosphingobium sp. EMRT-2: FA702_11350
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Entry
FA702_11350 CDS
T06038
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FA702_11350 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nor03021
]
FA702_11350 (rho)
03019 Messenger RNA biogenesis [BR:
nor03019
]
FA702_11350 (rho)
Transcription machinery [BR:
nor03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FA702_11350 (rho)
Messenger RNA biogenesis [BR:
nor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FA702_11350 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
AAA_22
ATPase_2
NACHT
S1CSD-TOTE-2
AAA_25
AAA
Fungal_virus_P2_C
AAA_14
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QCI94080
LinkDB
All DBs
Position
complement(2302963..2304219)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLKELKKKTPAELVEMAEELGVEGASTMRRQDLMFAILKEMAEDGEEILGIGTIEVLPD
GFGFLRSPEANYLAGPDDIYVSPNQVRKWGLRTGDTVEGEVRAPKDGERYFAITRLIKVN
FDDPEAVRHRVNFDNLTPLYPNERLKLDTLDPTVKDKSARVIDLVSPQGKGQRALIVAPP
RTGKTVLLQNMAKAITDNHPEVFLIVLLVDERPEEVTDMQRSVNGEVISSTFDEPASRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV
GKSGTRKEELLVAKDQLTKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFATMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaaggaactcaagaagaaaacccccgccgagctggtcgaaatggccgaagag
cttggtgtcgaaggcgcatcgaccatgcgccgccaggacctgatgttcgccatcctcaag
gagatggcggaagatggcgaggaaatcctcggcatcggcacgatcgaggtcctgcccgat
ggcttcggctttctccgttcgcccgaagcgaactacctggccggccccgacgacatctac
gtttcgcccaaccaggtccgcaaatggggtctgcgcaccggcgataccgtggaaggcgaa
gtgcgcgcgcccaaggacggcgagcgctatttcgcgatcacccggctgatcaaggtcaac
ttcgacgatcccgaggcggtccgccatcgcgtgaacttcgataacctgacgccgctctat
cccaacgagcgcctgaagctcgatacgctcgatcccacggtcaaggacaagtcggcccgc
gtgatcgatctcgtcagcccgcagggcaagggccagcgcgcgctgatcgtggcgccgccg
cgcaccggcaagaccgtgctgctgcagaacatggccaaggccatcaccgacaaccatccg
gaagtcttcctgatcgtgctgctcgtcgacgaacggcccgaggaagtgaccgacatgcag
cgttcggtgaacggcgaggtcatttcctcgacgttcgacgaacccgccagccgccacgtc
caggtcgccgaaatggtgatcgagaaggccaagcgcctggtcgagcacaagcgcgacgtg
gtgatcctgctggactccatcacccgccttggccgcgcctacaacaccgtagtgcccagc
tcgggcaaggtgctgaccggcggtgtcgacgccaacgcgctgcagcggccgaagcgcttc
ttcggtgccgcgcgcaacatcgaggaaggcggctcgctgtcgatcatcgccaccgcgctg
atcgataccggcagccgcatggacgaagtgatcttcgaggaattcaagggcaccggcaac
tcggaaatcgtgctcgaccgcaaggtggcggacaagcgcatcttcccggcgctggatgtc
ggcaaatccggcacgcgcaaggaagagctgctggtggcgaaggatcagctcaccaagatg
tgggtgctgcgccgcatcctcatgcagatgggcacggtcgacgcgatggaattccttctc
gacaagatgaaggattccaagaccaacgaagacttcttcgcgacgatgaaccagtaa
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