Novosphingobium sp. EMRT-2: FA702_11390
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Entry
FA702_11390 CDS
T06038
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor03030
DNA replication
nor03430
Mismatch repair
nor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FA702_11390 (dnaQ)
03430 Mismatch repair
FA702_11390 (dnaQ)
03440 Homologous recombination
FA702_11390 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nor03032
]
FA702_11390 (dnaQ)
03400 DNA repair and recombination proteins [BR:
nor03400
]
FA702_11390 (dnaQ)
Enzymes [BR:
nor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FA702_11390 (dnaQ)
DNA replication proteins [BR:
nor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FA702_11390 (dnaQ)
DNA repair and recombination proteins [BR:
nor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FA702_11390 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DUF3131
Motif
Other DBs
NCBI-ProteinID:
QCI94088
LinkDB
All DBs
Position
2309731..2310417
Genome browser
AA seq
228 aa
AA seq
DB search
MREIVFDTETTGLDPRSGDRLVEIGCIEMVNRVPTGDVFHAYFNPERGMPAEAEAVHGLS
EAFLSDKPKFAERAEELIAFLGDSPLVAHNAGFDFGFLNHELAACGLEAVDRDRMVDTVA
IARRKHPGAKLSLDALCTRYGIDRSHRTKHGALLDAELLAQLYVELMGGRQIGLELAAEA
AASVQTEELATVAVTRVFRTPRSYAASEAELARHAEFMAGFSDPVWSR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgtcttcgacacggaaacgaccggtctcgatccccggagcggcgatcgg
ctggtggagatcggttgcatcgaaatggtcaaccgggtgcctaccggggacgtgtttcat
gcctatttcaatcccgagcgcggcatgccggccgaggcggaagccgtccacggcctgtcc
gaggcgttcctgtccgacaagccgaagttcgccgaacgggcggaggaactgatcgccttc
ctgggcgacagtccgctggtggcgcacaacgccggcttcgatttcggcttcctcaatcac
gaactggcggcctgcgggctggaagcggtggaccgcgatcgcatggtcgatacggtcgcc
atcgcccggcgcaagcatcccggcgccaagctttcactggatgcgctgtgcacgcgctat
ggcatcgaccggagccatcgcaccaagcacggcgccttgctggacgcggaactgctggcg
cagctctacgtcgaactcatgggtgggcggcagatcggcctggaactggccgccgaggcg
gccgcttccgtgcagacggaagaactggccaccgtcgccgtcacccgcgtcttccgcacg
ccccggtcctatgccgcgagcgaggcggaactggcccgccatgccgagttcatggcgggt
ttcagcgatcccgtctggtcgcgctag
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