Novosphingobium sp. EMRT-2: FA702_12285
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Entry
FA702_12285 CDS
T06038
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FA702_12285 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nor03019
]
FA702_12285 (groL)
03110 Chaperones and folding catalysts [BR:
nor03110
]
FA702_12285 (groL)
03029 Mitochondrial biogenesis [BR:
nor03029
]
FA702_12285 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nor04147
]
FA702_12285 (groL)
Enzymes [BR:
nor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FA702_12285 (groL)
Messenger RNA biogenesis [BR:
nor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FA702_12285 (groL)
Chaperones and folding catalysts [BR:
nor03110
]
Heat shock proteins
HSP60 / Chaperonin
FA702_12285 (groL)
Mitochondrial biogenesis [BR:
nor03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FA702_12285 (groL)
Exosome [BR:
nor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FA702_12285 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FA702_12285 (groL)
Exosomal proteins of breast cancer cells
FA702_12285 (groL)
Exosomal proteins of colorectal cancer cells
FA702_12285 (groL)
Exosomal proteins of bladder cancer cells
FA702_12285 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCI94243
LinkDB
All DBs
Position
2490593..2492236
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVRFSRDARERILKGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMLREVASKANDKAGDGTTTATVLAQAIVREGMKSVAAGINPMDLKRGI
DIAVAKVVDNLKARSTPVAGSSEIAQVGIISANGDVEVGQKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPDKMTVELENPYILIHEKKLSSLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLGDIATLTAGEM
ISEDLGIKLESVTLAMLGQAKKVTIDKDNTTIVDGAGSADEIKARVEQIRAQIEVTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVTGGGTALL
YATRALDGLTGANEDQTRGVDIVRKAITAPVKQIAENAGHDGAVVAGKLLDQTDEGIGFN
AATDVYENLKAAGVIDPTKVVRTALQDAASVAGLLITTEAAISEKPDDKPAMPPMGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtacgcttttcgcgcgacgcgcgcgaacgcatcctcaagggcgtc
gacatcctcgccgacgcggtgaaggtcacgctcggccccaagggccgcaacgtcgtgatc
gacaagagcttcggcgcgccgcgcatcaccaaggacggtgtgtcggtcgccaaggaaatc
gaactcaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaagtggccagcaag
gccaacgacaaggccggtgacggcaccaccaccgcgaccgtgctcgcccaggcgattgtg
cgcgaaggcatgaagtcggttgccgccggcatcaacccgatggatctgaagcgcggcatc
gacatcgccgtcgccaaggtcgtggacaacctgaaggcccgttcgaccccggtcgccggt
tcgtcggaaatcgcgcaggtcggcatcatctcggccaacggcgacgtggaagtcggccag
aagatcgcggaagcgatggaaaaggtcggcaaggaaggcgtgatcaccgtggaagaggcc
aagggcctcgaattcgaactcgatgtcgtcgaaggcatgcagttcgaccgcggctacctc
tcgccctacttcatcaccaacccggacaagatgacggtcgaactcgaaaacccgtacatc
ctgatccacgagaagaagctgtcgtcgctgcaggcgatgctgccgatcctcgaagcggtc
gtgcagtcgggccgtccgctgctgatcatcgccgaagacatcgaaggcgaagcgctggcc
accctcgtggtcaacaagctgcgcggtggcctgaagatcgccgccgtcaaggcgccgggc
ttcggtgaccgtcgcaaggccatgctgggcgacatcgccacgctgaccgccggcgagatg
atctcggaagacctcggcatcaagctggaaagcgtgacgctcgccatgctcggccaggcc
aagaaggtcaccatcgacaaggacaacaccacgatcgtcgacggcgccggttcggcggac
gagatcaaggcccgcgtcgaacagatccgcgcccagatcgaagtcaccaccagcgactac
gaccgcgagaagctgcaggaacgcctggccaagcttgctggcggcgtggccgtgatcaag
gtcggcggtgcgaccgaagtcgaggtgaaggaacgcaaggaccgcgttgacgacgccctg
cacgccacccgcgcggcggtggaagaaggcatcgtcacgggcggcggcacggcgctgctt
tacgccacccgcgcgctcgacggcctgaccggtgccaacgaagaccagacccgtggcgtg
gacatcgtccgcaaggcgatcaccgccccggtcaagcagatcgcggaaaacgcgggccat
gatggcgccgtcgtcgccggcaagctgctcgaccagacggacgaaggcatcggcttcaac
gccgccaccgacgtctatgaaaacctgaaggccgctggcgtgatcgatccgaccaaggtc
gtccgcaccgcgctgcaggacgctgcgtcggtcgccggcctgctgatcaccaccgaagcg
gcgatcagcgaaaagccggacgacaagcccgcgatgccgccgatgggcggtggcatgggc
ggcatgggcggcatggacttctaa
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