Novosphingobium sp. EMRT-2: FA702_13470
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Entry
FA702_13470 CDS
T06038
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FA702_13470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nor03021
]
FA702_13470
03400 DNA repair and recombination proteins [BR:
nor03400
]
FA702_13470
Enzymes [BR:
nor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FA702_13470
Transcription machinery [BR:
nor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FA702_13470
DNA repair and recombination proteins [BR:
nor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FA702_13470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
QCI94449
UniProt:
A0A4D7DHL7
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All DBs
Position
2730829..2731890
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AA seq
353 aa
AA seq
DB search
MTVNIKNWQELKKPNNLEIKPGSDPKRRATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMQGEGPKRLQLSATGPGEVKAGDI
AVTGDIEVMNKDLVICHLDEGATFNMELTCDTGKGYVPAVSNRPADAPIGLIPIDSLYSP
VRQVSYKVDNARIGQELDFDKLSLTVETDGTVTPEDAVAYAARILQDQLALFVHFDDQVP
TGHVPAMAGLAAHTPEENDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTE
AEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatcaagaactggcaggaactgaagaagcccaacaatctcgagatcaag
cccggctctgatccgaagcgccgtgcgacgttcgtcgccgagccgctcgagcgtggcttc
ggccttacgctcggcaatgcgcttcgccgcgtgctgctctcgtcgttgcagggtgctgcc
gtcacctcgatcaagatcgagaacgtgctgcacgagttctcgtcgctcgccggggtgcgc
gaggacgtgaccgacatcgtgctcaacgtgaagcagattgcgctgaagatgcagggcgaa
ggcccgaagcgtctccagctttcggcgaccggaccgggcgaagtgaaggccggcgacatc
gccgtgaccggcgacatcgaggtgatgaacaaggatctcgtgatctgtcatctcgacgaa
ggcgcgaccttcaacatggaactgacgtgcgataccggcaagggctatgtccccgccgtg
tcgaaccgtccggccgacgcgccgatcgggctgatcccgatcgactcgctctattcgccg
gtgcgccaggtttcctacaaggtcgacaacgcccgtatcggccaggagcttgacttcgac
aagctgagcctgacggtcgaaaccgacggcaccgtgacgccggaagacgccgtggcctat
gccgcgcgcatcctgcaggatcagctggcgctgttcgtccacttcgacgatcaggtgccg
accggccacgtgcccgcgatggccggccttgccgcgcacacgccggaagagaacgacgcc
aaccagctcaaccgctacctgctcaagaaggtggacgaactggagctgtcggtgcggtcg
gccaactgcctcaagaacgacaacatcatctacatcggcgatctggtccagaagaccgag
gccgagatgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaagtc
ctgtcgtcgatgggcctgcgccttggcatggacatccccggctggccgccggaaaacatc
gaggaaatggccaagaagctcgaacaggagctgctgggctaa
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