Novosphingobium sp. EMRT-2: FA702_13930
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Entry
FA702_13930 CDS
T06038
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor03420
Nucleotide excision repair
nor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FA702_13930
03430 Mismatch repair
FA702_13930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nor03400
]
FA702_13930
Enzymes [BR:
nor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FA702_13930
DNA repair and recombination proteins [BR:
nor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FA702_13930
MMR (mismatch excision repair)
Other MMR factors
FA702_13930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCI94528
UniProt:
A0A4D7DGT7
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All DBs
Position
complement(2843105..2845027)
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AA seq
640 aa
AA seq
DB search
MAWDTGLDTGSVAYGIASAPEPRVRVIAGPGTGKSFAMKRRVARLLESGVAPKELLAVTF
TRVAAEDLHRELQKLGVPGCEELEGQTLHSLAMRILSRQHVLEAVGRTPRSLNTFEMKAL
ICDIADASGGKLAAKKMIQGYTAAWAQSQGDEPGFPNNDEEKAFSSALLAWLEFHYGMLI
GELIPYLVRYLKDNPAAAERSEFKHLLVDEYQDLNKAEQTAIAYLGEEAEICIVGDDDQS
IYSFKYAHPEGIREWKDLHAACADLEMADCHRCPTTVVEMANTLINVNTNRAPRALTPLP
EKGAGEVAIVQVPYLHSEATWITAKIKELLEKGVHPSEIIVLVQRAVVGKPILNALKGEG
VPAKSYYEESQLDSEAAQMRFALFKLFLDKEDRVALRYLLGWDRDDFRCKPYARVRQHCE
ASGDSPWVAMDKLADDALTIPYTKPLIEQFKLIKEALEELEAVKDDLAAFTDTLFPDADP
DVSELRELALAQMEAAETPEDLLSAMMQEITQPDIPPTVEEVRLMSLHKSKGLSSPYVFI
AGCVEGILPPSFDDAPSKEAKDAALEEARRLFYVGITRVKADPANDRPGSLFITYAQQMP
AKDAYGAKVAFKTQSGPMANLLPSRFIGELGPAAPAPVKG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggatacgggactggacactggcagcgtagcttacggcatcgcatcggcgccg
gagccgcgcgtgcgggtcatcgccggtcccggcacgggcaagtccttcgccatgaagcgt
cgggtcgctcgcctccttgagtcgggcgtggcgcccaaagagctccttgccgtgacattc
acgcgggttgcggcagaggacctccatcgggaattgcagaagctcggagtgccgggatgc
gaggaactcgaggggcagaccctccatagcctcgccatgcgcatcctatcccgacagcac
gtcctcgaggccgtggggcgcacccctcggtcgctcaacaccttcgagatgaaggccttg
atctgcgacattgccgatgcgagcggcgggaagctcgctgcgaagaagatgattcagggg
tacactgccgcatgggcgcagagccaaggggacgagcccggcttccccaacaacgatgag
gagaaggcattttcgtccgcccttctcgcttggctcgagtttcactacgggatgctgatc
ggtgagctgattccgtaccttgtccgttacctcaaggacaatcccgcggcggccgagcgc
tcggaattcaagcacctcctcgttgacgagtatcaggacctcaacaaggccgagcagacc
gccattgcctacctcggggaggaggctgaaatctgcatcgtgggcgacgatgaccagtcc
atctacagctttaagtacgcccaccccgagggcatccgtgagtggaaggaccttcacgcg
gcttgcgctgatctcgagatggccgactgccaccgctgcccaaccacggtggtcgagatg
gcgaacacgctcatcaacgtgaataccaaccgcgcgccccgagcgctgacgcccctgcca
gagaagggagcgggcgaggtcgccatcgtgcaggtgccgtacctccacagcgaggcgacg
tggatcacggcgaagatcaaggagctcctcgagaagggcgtccaccccagcgagataatc
gtcctcgtgcagcgcgccgttgtcgggaagccaatcctaaacgccctcaagggcgagggt
gtcccggccaagtcatactatgaggagagccagctcgattctgaagcggcgcagatgcgt
ttcgcgctgttcaagttattcctcgacaaagaggaccgggttgcgctgcgctatcttctc
ggctgggaccgggacgatttccgatgcaagccatacgctcgggtgcggcaacattgcgag
gccagcggggatagcccttgggttgcgatggacaagcttgcggacgacgcgctcaccatc
ccgtacaccaagccactgatcgagcaattcaagctcatcaaggaagccctcgaagagctc
gaggcggttaaggacgatctcgcagctttcactgataccttgttcccggacgcggaccct
gacgtatcagaattgcgcgaactcgcgctggcgcagatggaggcggccgagacgcccgag
gacctcctctccgcaatgatgcaggagattacccaaccggacattccgcctaccgtcgag
gaggtccggttaatgagcctacacaagagtaagggccttagctcgccctatgtgtttata
gccggttgcgtggagggcatcctcccgccctccttcgatgatgcgccctcgaaggaggcc
aaggacgcagcgctcgaggaagcccggcggctgttctatgtgggcatcacgcgggtgaag
gcggacccggcgaatgaccggcccgggagcctgttcatcacgtatgcccaacagatgccg
gctaaggacgcatacggggcgaaggtggcgttcaagacgcaatcggggccaatggcgaac
ctgctgccgagccgctttattggcgagctcggcccggcggcgcccgcgccggtcaagggg
tag
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