Novosphingobium sp. EMRT-2: FA702_15285
Help
Entry
FA702_15285 CDS
T06038
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nor
Novosphingobium sp. EMRT-2
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nor03016
]
FA702_15285 (rnd)
Enzymes [BR:
nor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FA702_15285 (rnd)
Transfer RNA biogenesis [BR:
nor03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FA702_15285 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QCI94748
UniProt:
A0A4D7DH89
LinkDB
All DBs
Position
complement(3121215..3122426)
Genome browser
AA seq
403 aa
AA seq
DB search
MKIHSLITTTDALAALCERLAKSDFVTVDTEFMRENTYWPELCLVQIANTEEAAAVDPLA
PGIDLSPLLDLLVDNEDVLKVFHAGGQDVEIIYNLTGKTPHPIFDTQIAMMAVSQSEQIG
YSNLVESWLGLSIDKGARFTDWSRRPLTERQIEYAIGDVTHLSKIFPKLLKRLIKTGRGE
WLDIEMEKLADPANYKSDPQTVWQKIRPPSRNPAVLGRMRAIAAWREAEAMDKNIPRGRI
MRDETLADIASHPPREQHELAKVRGLSSGWKDNEIGRRLMQTLAEAKPLTEAEMPPKAPR
GAPLGKEGALVADLLKLLLKIRSREIDIAARLLARSDDLEALAAGQRRNLPILEGWRFEQ
FGRDALDLVEGKLAFAVVGGKLKMAHIDDIGGGSTAEPVAHID
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacattcgctgatcaccaccaccgacgctctcgccgccttgtgcgaacgcctc
gcgaagtccgatttcgtcaccgtcgacacggaattcatgcgcgagaacacctattggccc
gaactctgcctggtgcagatcgccaataccgaggaagccgccgcggtcgatccgctggcg
ccgggaatcgacctttccccgctgctcgacctgctggtggacaatgaggacgtgctcaag
gtcttccacgccggcgggcaggacgtggagatcatctacaacctcaccggcaagaccccg
cacccgatcttcgacacgcagatcgcgatgatggcggtgagccaatcggaacagatcggc
tattccaacctcgtcgaaagctggctgggcctgtcgatcgacaagggcgcgcgcttcacc
gactggtcgcgccggccgctcaccgaacggcagatcgaatacgcgatcggcgacgtgacg
cacctgtcgaagatttttcccaagctgctcaagcgcctcatcaagaccgggcgcggcgaa
tggctcgacatcgagatggaaaagctggcggacccggccaactacaaatccgatccgcag
accgtgtggcagaaaatccgcccacccagccgcaatcccgccgtgctgggccgcatgcgc
gccatcgccgcctggcgcgaggccgaggcgatggacaagaacattccgcgcggccgcatc
atgcgcgatgaaacgctggccgacatcgccagccaccccccgcgcgaacagcacgaactc
gccaaggtgcgcgggctttcgagcggatggaaggacaacgagatcggccgccgcctgatg
caaacgctcgccgaggcgaagccgctgaccgaagccgaaatgccgcccaaggcgccgcgc
ggcgcgccgctgggcaaggaaggcgcactggtggccgacctgctcaagctgctactcaag
atccgcagccgcgagatcgacatcgccgcccgcctgctggcgcgcagcgacgatctggag
gcgctggccgccgggcagcggcgcaacctgccgatcctggaaggatggcgcttcgaacag
ttcgggcgcgacgcgctcgatctcgtcgagggcaagctggccttcgcggtcgtgggcggc
aagctcaagatggcgcacatcgacgacatcggcggcggcagcacggccgagccggtcgcg
catatcgattga
DBGET
integrated database retrieval system
