Novosphingobium sp. EMRT-2: FA702_16195
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Entry
FA702_16195 CDS
T06038
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nor
Novosphingobium sp. EMRT-2
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nor03016
]
FA702_16195 (truA)
Enzymes [BR:
nor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FA702_16195 (truA)
Transfer RNA biogenesis [BR:
nor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FA702_16195 (truA)
Prokaryotic type
FA702_16195 (truA)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QCI94904
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Position
3322101..3322853
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AA seq
250 aa
AA seq
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MTRFALTLEWNGQPYMGFQRQAHGPSVQQAVEEAAFAVTGQAVTLHAAGRTDTGVHALAM
RAHFDLARDFDPFRLSEALNARLRLAGHAVAVLEARVVDADWHARFSCLGRAYEYRIANR
RAPLTLEAGLAWRIARPLDAGAMHAAAQELVGHHDFTTFRSVHCQAASPLKTLDRLDVRR
EGDHVIVEAAARSFLHHQVRSMVGCLALVGQGMWTRADLAAALAAKDRCKLGLNAPPEGL
YFVKAIYPGE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtttcgcgctcacgctcgaatggaacggccagccctacatgggcttccagagg
caggcgcacggcccatcggtgcagcaggcggtggaggaggcggcgttcgcggtcaccggg
caggcggtgacgctccatgccgccgggcggaccgataccggcgtccacgcgctcgcgatg
cgcgcgcatttcgatctggcgcgcgatttcgatccgttccgcctgtccgaggcgctgaac
gcgcggctgcggctggccgggcacgcggtggcggtgctggaggcgcgggtggttgacgcg
gactggcatgcgcgcttttcctgcctggggcgggcctacgaataccgcatcgccaaccgc
cgcgcgccgttgacgctggaggcggggctggcctggcgcatcgcccgaccgctggatgcc
ggggcgatgcacgcggcggcgcaggaactggtcggccaccatgatttcacgacgttccgg
tcggtccattgccaggcggcgagtccgctcaagacgctcgaccggctggacgtgcggcgc
gagggcgatcacgtgatcgtcgaggcggcggcgcgcagcttcctgcaccatcaggtgcgc
tcgatggtgggatgcctggcgctggtggggcaggggatgtggacccgcgccgacctcgcc
gccgcgctggcggcgaaagaccgttgcaaattaggacttaacgcgcctccggaagggctc
tacttcgtgaaggcgatctatccgggagaatga
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