Novosphingobium sp. EMRT-2: FA702_16780
Help
Entry
FA702_16780 CDS
T06038
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nor
Novosphingobium sp. EMRT-2
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nor03032
]
FA702_16780 (topA)
03400 DNA repair and recombination proteins [BR:
nor03400
]
FA702_16780 (topA)
Enzymes [BR:
nor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FA702_16780 (topA)
DNA replication proteins [BR:
nor03032
]
Prokaryotic type
DNA Topoisomerases
FA702_16780 (topA)
DNA repair and recombination proteins [BR:
nor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FA702_16780 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QCI95007
UniProt:
A0A4D7DGU3
LinkDB
All DBs
Position
3457798..3460389
Genome browser
AA seq
863 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGPGYKVLASYGHVRDLPVKDGSVRPDEDFAMDWELYGDKQS
RVKAITDAAKEADRLILATDPDREGEAISWHVRELLSKRRALPKEVERVTFNAITKATVT
EAMQHPRALDQDLIDAYLARRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLIVERE
REIESFRAQEYWSVVARLEQGGTEFQARLVRFDGDKLDRLSLGDEGVAMRAKAAVEGATF
RVEEVETKPARRNPYPPFTTSTLQQEAARKLGFSASHTMRVAQTLYEAGAITYMRTDGVQ
MDPSAISMARKAISDRYDGHYLPEKPRHYETKAKNAQEAHEAIRPTDFAKDRHGSGDEAR
LYDLIWKRAIASQMASASLERTTVTLREGTGRHELRATGQVVKFPGFLAVYEEGRDQKQD
AEDDDSGLLPMMNKGDTPAKRGVDATQHFTQPPPRYSEASLVKRLEELGIGRPSTYAATL
QVLKDRNYVRTEKNRFFAEESGRMLTAFLERFFDRYVAYDFTAGMEDELDDVSGGRAAWK
QVLAAFWRDFKPKSDEVMEKKPSEVTAALDVFLEDYLFPPKADGSDPRLCPKCGEGRLSL
RGGRYGAFIACSNYPECKFTRKFAQPGGADGEGGDEDGALGKDPATGLEVVRRSGRFGPY
IQLGEGKEAKRASIPKDIPELDLEWALKLLSLPREIGAHPESGKPITASIGRYGPYLAHD
GKYARLRSTAEVFETGMNAAVVKLAEAANGAAARGSRAPAEPLKTFGPHPTSGGEIKLMA
GRYGPYVTDGTTNATLPRDKQPEALTLEEAIVLIDERAAKGPAKGKKKAPAKKAAPKKAA
PKKAAGEKKAAAKKPAAKKAAAE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtcattgttgaatcgccggccaaggccaagaccatcgagaagtaccttggc
cccggctacaaggtcctcgcctcctacggccacgtccgcgacctgcccgtgaaggatggc
tccgtccgcccggatgaggacttcgcgatggactgggagctttacggcgacaagcaatcg
cgcgtgaaggcgatcaccgacgccgcgaaggaagccgaccgtctgattctcgccaccgac
cctgatcgcgagggcgaggcgatttcctggcacgtgcgcgaactgctgtcgaagcggcgc
gcgctgcccaaggaggtggagcgagtcaccttcaacgccatcaccaaggccaccgtgacc
gaggcgatgcagcacccgcgcgcgctcgatcaggacctgatcgacgcctatctggcccgc
cgcgcgctggattacctgttcggcttcacgctctcgcccgtgctgtggcgcaaactgccg
ggcgccaaatccgccggccgcgtgcagtccgtggcgcttcgcctgatagtggagcgcgag
cgcgagatcgaatcgttccgcgcgcaggaatactggtcggtcgtcgcgcggctggagcag
ggcggcaccgagttccaggcccgtctggtgcgcttcgacggcgacaagctcgatcggctg
agcctgggtgacgaaggcgtggcgatgcgcgccaaggcggcggtggaaggcgccacgttc
cgcgtcgaggaggtcgagaccaagccggcccgccgcaatccctatccgccgttcaccacc
tccacgctgcagcaggaagcggcgcgcaagctgggcttttcggccagccacaccatgcgc
gtggcacagacgctctacgaagccggcgcgatcacctatatgcggaccgacggcgtgcag
atggatcccagcgccatcagcatggcgcgcaaggcgatctcggaccgctatgacgggcat
tacctgcccgaaaagccccggcactacgaaaccaaggccaagaacgcgcaggaagcgcac
gaggcgatccgcccgaccgatttcgccaaggaccgccatggttcgggggacgaagcgcgg
ctctacgacctgatctggaagcgcgcgatcgccagccagatggcgtcggccagtctggaa
cgcaccacggtcacgctgcgcgagggcaccgggcggcacgaattgcgcgccaccgggcag
gtggtgaagttccccggcttcctggcggtgtacgaggaagggcgcgaccagaagcaggat
gcggaggacgacgattccggcttgctgcctatgatgaacaagggggataccccggcgaag
cgcggggtggacgccacccagcactttacccagccgccaccgcgctattcggaagccagc
ctggtcaagcggctggaggaactcggcattggccggccttcgacttatgccgccacgttg
caggtgctcaaggaccgtaactacgtccgcaccgagaagaaccgtttcttcgccgaggaa
tcggggcggatgctgacggcgttcctcgaacgcttcttcgatcgctacgtcgcctacgat
ttcaccgccggcatggaagacgaactggacgacgtctccggtggccgggcggcgtggaag
caggtgctggccgcgttctggcgcgatttcaagccgaagtccgacgaggtgatggagaag
aagccgagcgaggtaaccgccgcgctcgacgtcttccttgaggactatctgttcccgccc
aaggcggacggcagcgatccgcgcctgtgccccaagtgcggggaagggcgcctctcgctg
cgcggcggacgctatggcgcgttcatcgcttgctcgaactatccggagtgcaagttcacc
cgcaagttcgcccagcccggcggggccgatggcgaaggtggagacgaggacggcgcgctg
ggcaaggacccggccaccggtctggaggtggtgcgccggtcgggccggttcggtccctac
atccagctgggcgaaggcaaggaagccaagcgcgcctcgatccccaaggacattcccgaa
ctcgatctggaatgggcgctgaagctgctcagcctcccgcgcgagatcggggcgcatccg
gaaagcggcaagccgatcacggccagcatcgggcgctatggcccctatctggcgcatgac
ggcaagtacgcgcggctgcgctccaccgccgaagtgttcgagaccggcatgaacgccgcc
gtggtcaagctggccgaagcggccaatggcgcggccgcgcggggatcgcgcgcgccggcc
gaaccgctcaagaccttcgggccgcatccgacctcgggcggcgagatcaagctgatggcg
ggccgctatgggccttacgttaccgacggcaccaccaacgccacgctcccgcgcgacaag
cagcccgaagcgctgacgctggaggaagcgatcgtcctgatcgacgagcgcgccgccaag
gggcctgccaagggcaagaagaaggctcctgccaagaaggcggcaccaaagaaggccgcg
ccgaagaaggcggctggcgagaagaaagcagcggcgaagaagcctgcggcaaagaaggcg
gctgccgagtag
DBGET
integrated database retrieval system
