Novosphingobium sp. EMRT-2: FA702_17320
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Entry
FA702_17320 CDS
T06038
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor00550
Peptidoglycan biosynthesis
nor01100
Metabolic pathways
nor01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FA702_17320 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FA702_17320 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nor01011
]
FA702_17320 (mrdA)
Enzymes [BR:
nor01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FA702_17320 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nor01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FA702_17320 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QCI95545
UniProt:
A0A4D7DH87
LinkDB
All DBs
Position
complement(3572439..3574523)
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AA seq
694 aa
AA seq
DB search
MSSARLTDTFNRRTFVLGSAMGGIGMLLAVRLGYLSIMQNEKYKAASESNRVNLTLIPPR
RGWILDRNGAALASNRADFRVDLIPDRVVDADKTLATLASLLDLSPDKVGDIHDKLDKSR
GFQPVEVAANLNWDKFAAVSVRLPELPGVVPQRGYSRFYPTGATVGHLVGYVGPASAEDY
ERERNPLLITPGFKIGKDALEKYFETRLRGVPGARRVEATASGRVVRDLGTREDVPGKPI
QLTINGPLQDYASRRIGLESGSVVVIDCLTGDVLAMASMPSFDPNSFSDGIGRIEWKMLS
DDDHVPLRNKVLRGLYPPGSTVKPMVALSFLEAGLDPNASVNCAGGLRVGNRVFHCWNHR
GHGATNMAKGIYQSCDVYFYHFAQQMGMDVIAAMAKRLGLGQEFPLPVAGQSYGTVPDPA
WKLRKYKQPWAIYDTVNATIGQGYMLVNPLQQAVMASRIASGLELMPRLLLDRHAPQPKS
MGFKQEHLDYIHAAMNEVVNGRGTAGKARLPIPNVQMAGKTGTAQVVGLNIGNGKGGLWK
HRDHGHFICFAPFDKPRYACAVAIEHGGGSGAAYPIARDVMTFLFDPGKALEVLEGFEKQ
WGGNVQQRMAARYDAYAAQYGASAPKAADDAQVAQEVAAENKPVPEPTAAQTDAAPPPPE
PTTPEPGTPAPGASPRPAPGTAPAPATPATSGAQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggcccggctgactgacaccttcaaccgccgcaccttcgtgctgggatccgcc
atgggcggcatcggcatgctgctggccgtgcggctcggctacctctcgatcatgcagaac
gagaagtacaaggcggcgtcggagagcaaccgcgtcaacctgacgctgattccgccgcgg
cgcggctggattctcgatcgcaacggcgcggcgctggcatcgaaccgcgccgacttccgc
gtcgacctgattcccgaccgggtcgtggacgcggacaagacgctggccacgctcgcctcg
ctgctcgacctttcgcccgacaaggtgggcgacatccacgacaagctggacaaatcgcgc
gggttccagccggtcgaagtcgccgccaatctcaactgggacaaattcgccgccgtcagc
gtgcgcctgcccgaactgccgggcgtggtgccgcagcgcggctattcgcgcttctacccc
acgggcgcgaccgtggggcacctggtcggctatgtcggcccggcttcggccgaggactac
gaacgcgaacgcaatccgctgctgatcacgccgggcttcaagatcggcaaggacgcgctg
gaaaagtatttcgagacgcgcctgcgcggcgtgccgggcgcgcggcgggtggaagcgacc
gccagcgggcgcgtggtgcgcgatctgggcacgcgcgaggacgtgccgggcaagccgatc
cagctcactatcaacggcccgttgcaggactatgcctcgcgccgcatcggtctggaatcc
gggtcggtcgtggtgatcgactgcctgaccggcgatgtgctggccatggcctcgatgccc
agcttcgatcccaacagcttctccgacggcatcgggcgcatcgaatggaagatgctatcg
gacgacgaccatgtgcccttgcgcaacaaggttctgcgcgggctttatccgccgggctcg
accgtgaagccgatggtcgcgctgtcgttcctcgaagcggggctcgatcccaatgcctcg
gtcaactgcgccggtggcctgcgcgtgggcaaccgcgtgttccactgctggaaccaccgg
ggccacggcgctaccaacatggccaagggcatctaccagtcgtgcgacgtgtatttctat
cacttcgcgcaacagatgggcatggacgtgatcgcggcgatggcgaagcggctggggctg
gggcaggaatttccgctgcccgtcgccgggcaatcctatggcacggtgcccgatcccgcg
tggaagctgcgcaagtacaagcagccctgggcgatctatgacacggtgaacgccaccatc
gggcaggggtacatgctggtgaacccgctgcagcaggcggtcatggcctcgcgcatcgcc
tccggcctcgaactcatgccgcgcctgctgctcgaccggcacgcgcctcaacccaagtcc
atgggcttcaagcaggaacacctcgattacatccacgcggcgatgaacgaagtcgtcaac
gggcgtggcaccgccggcaaggcgcgcctgcccattcccaacgtgcagatggcgggcaag
accggcacggcacaagtcgtcggcctcaacatcggcaacggcaagggcgggctgtggaag
caccgtgaccacggccatttcatctgcttcgccccgttcgacaagccgcgctatgcctgc
gccgtcgccatagagcacggcggcggatcgggcgcggcctatcccatcgcgcgcgacgtg
atgacgttcctgttcgatccgggcaaggcgctggaagtgctcgaaggcttcgaaaagcag
tggggcggcaacgtgcaacagcgcatggcggcccggtacgacgcctatgccgcgcaatac
ggcgcttccgcgcccaaggcggcggacgacgcgcaagtggcgcaggaagtcgcggccgaa
aacaagccggtgcccgaaccgaccgccgcgcagaccgacgccgcgccgcctccgcccgag
ccgacgacgcccgaaccgggcacgccggcgccgggcgcatcgccgcggcctgcaccgggc
accgctccggcacccgccactcccgccacgtccggcgcgcaatag
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