Novosphingobium sp. EMRT-2: FA702_17645
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Entry
FA702_17645 CDS
T06038
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nor
Novosphingobium sp. EMRT-2
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nor03032
]
FA702_17645
03036 Chromosome and associated proteins [BR:
nor03036
]
FA702_17645
03400 DNA repair and recombination proteins [BR:
nor03400
]
FA702_17645
DNA replication proteins [BR:
nor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FA702_17645
Chromosome and associated proteins [BR:
nor03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FA702_17645
DNA repair and recombination proteins [BR:
nor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FA702_17645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
VWA_3
Motif
Other DBs
NCBI-ProteinID:
QCI95150
LinkDB
All DBs
Position
3649293..3649565
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNDLISAVADASGLSKGDATKAVEAVFESISGALSKGDEVRLVGFGTFSVAKRKASTG
RNPRTGEPMSIKASSQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacgatttgatcagcgctgtcgccgatgccagcggcctctcgaagggtgat
gccacgaaggcggtggaagccgttttcgaatccatctccggggcgctctcgaagggcgac
gaagtgcgtctggtcggttttggcacgttctcggtcgccaagcgcaaggcttcgaccggc
cgtaacccgcgcacgggcgagccgatgtcgatcaaggcctcgtcgcagccgaagttcaag
gcgggcaagggcctgaaggacgcggtgaactga
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