Nostoc sp. PCC 7107: Nos7107_0632
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Entry
Nos7107_0632 CDS
T02362
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nos
Nostoc sp. PCC 7107
Brite
KEGG Orthology (KO) [BR:
nos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nos03021
]
Nos7107_0632
Transcription machinery [BR:
nos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Nos7107_0632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Rv2175c_wHTH
DUF6192
CM_1
DUF5315
Motif
Other DBs
NCBI-ProteinID:
AFY41304
UniProt:
K9Q859
LinkDB
All DBs
Position
complement(746168..747151)
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AA seq
327 aa
AA seq
DB search
MPTVNTQTENLNTKFTADMVRTYLREIGRVPLLTREQEIVFGKQVQQMMTLVEAKEALAK
KLHREPSLPEWANHVKQSETDVKQTVAQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPMRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQTLGRSPTPAEIAKELELEPAQIREYLNMARQPVSLDVRVGDNQDTELQEML
EDDGPSPEYYTTQEFLRQDLNTLLAELTPQQREVVALRFGLEDGNELSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVKEYVAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgttaacacccaaactgaaaacctgaacaccaaattcacggctgatatggtg
cgaacctatctgcgggaaattggtcgtgtaccactgctaacccgtgagcaagaaattgtc
tttgggaagcaggtgcaacaaatgatgacacttgttgaagcgaaagaagctttggcgaag
aaattgcaccgcgaaccgagtttaccagaatgggcgaaccatgttaaacaatcagaaacc
gatgtcaaacaaacggtagctcaaggtaaacgagcgaagcaaaaaatgattgaggcgaac
ctgcgcttagttgtcgcgatcgccaaaaaataccagaaacgcaacatggaatttctcgat
ttaatccaagaaggaacactcggattagagcgaggagtagagaaatttgacccgatgcgg
ggatataaattctcaacctacgcttactggtggattcgccaagcaattactcgtgcgatc
gctcaacaagggcgcaccattcgcttaccaattcacattaccgaaaaactcaataaaatc
aaaaaagtgcagcgcgaactagcccaaacattagggcgttctcctacacccgccgaaatc
gccaaagaactggaattagaacctgctcaaattcgagaatatctgaatatggcacgtcaa
ccagtttctttagatgttcgtgtcggtgataaccaagacaccgaactgcaagaaatgttg
gaagatgatgggccatccccagaatattacaccacccaagaattcttgcgccaagacctc
aacaccttgctggctgaactcactccccaacaacgggaagttgtagccctgcgctttggc
ttagaagatggtaacgaactatccttggcaaaagttggtgaaagattgaatctcagccgc
gaacgtgttcgtcaactcgaacatcaagccttagcccatctgcgccgccgtcgcgccaac
gtcaaagaatacgttgctagttaa
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