Nostoc sp. PCC 7107: Nos7107_0702
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Entry
Nos7107_0702 CDS
T02362
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nos
Nostoc sp. PCC 7107
Brite
KEGG Orthology (KO) [BR:
nos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nos03021
]
Nos7107_0702
Transcription machinery [BR:
nos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Nos7107_0702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_10
HTH_28
HTH_20
HTH_IclR
HTH_11
DUF4143
Motif
Other DBs
NCBI-ProteinID:
AFY41371
UniProt:
K9Q8B2
LinkDB
All DBs
Position
complement(816675..817625)
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AA seq
316 aa
AA seq
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MSSLSPDMVRVYLREIGQFPLLTSDQEITYGRQVQQMIAIEGQKKQLSQQLHREPKLAEL
ADFVNKSETEVTQILQLGQRAKQKMVTANLRLVVSIAKKYQRRNLELLDLIQEGAIGLQR
GIEKFDPNRGYKLSTYAYWWISQAITRAIAEKSRAVRLPIHVNEKLNQIKKVQRELFQTL
GRRATVTEIAQKLDIQASQIREYLSAASATISLDLKVGDNQDTELSELLSDDGISPNEQI
TQEMLRQDLDNLLASLKPVQREVLILRFGLLDNQERSLAQIGEKLNVSRERVRQIQQQAM
NILRRQQPEMGQYLSS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcctaagtcctgacatggtacgcgtttatttacgagagattggccagttccct
ttactcacctcagaccaagaaataacttatggcaggcaagtacagcaaatgattgccatt
gaggggcagaaaaagcagcttagtcaacaattacatcgggaaccgaagttagcagaatta
gcagattttgtcaacaaaagcgaaactgaagttactcaaatacttcagcttggtcagaga
gctaaacaaaaaatggtgacagcaaacctccggctggtggtttccatcgccaaaaaatat
cagcgtcgcaatctggaattattagatttgattcaagaaggcgcgatcggtttacaacga
ggtatagaaaagtttgatcccaaccgcggttataagttatcaacttacgcctactggtgg
attagtcaagctatcaccagagcgatcgccgaaaaatcccgtgctgtcaggctaccaatt
catgtgaacgaaaaactcaatcaaattaaaaaagtccagcgagaattgtttcaaaccctt
ggtcgtcgtgccacagttacagagattgctcaaaaattggatatacaagccagccaaatt
cgagaatatctcagtgctgctagtgcgacaatttctttagatttaaaagttggcgataac
caagacacagaactcagtgaacttttgagtgatgatggcatctcaccaaatgaacaaatt
acccaagaaatgctccgccaggacttggataatttgttagcttcactcaaaccagtgcaa
cgtgaagttttaattttgcgttttggactgttagataatcaagaacgcagtttggctcag
attggcgaaaagctcaatgtcagccgagaacgagttcgtcaaattcagcagcaagctatg
aatattttgcgtcgtcaacaaccagaaatgggacaatatttatcttcttga
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