Nostoc sp. PCC 7107: Nos7107_2088
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Entry
Nos7107_2088 CDS
T02362
Name
(GenBank) WD-40 repeat-containing protein
Organism
nos
Nostoc sp. PCC 7107
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_IFT122_1st
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
nSTAND1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_ELP1_1st
Ge1_WD40
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF12
PROPPIN
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
AAA_16
B-prop_COPA_B_2nd
AAA_22
TPR_12
RsgA_GTPase
CC149
VIT1
Motif
Other DBs
NCBI-ProteinID:
AFY42711
UniProt:
K9QC24
LinkDB
All DBs
Position
2419783..2424861
Genome browser
AA seq
1692 aa
AA seq
DB search
MVEHTQADIKSANQRALRSLSRAISLSRGQFSVVLVCCNYRVLQAQILQQLEASSLGSIK
QLVLPHNARSLYSTIHVQLRTDEQQPAALNILGLESVERIDDLLSSINQIRDEFPKRHSF
PMIFWVNDQVLQKVVRLAPDFASWAATPIRFEMTTTQLQEFLRQETDSLFATVLPTQHQD
NQGTHSTLEQVWEHNDELHCAIQELRQRGITLEPELYASLEFVFGLDNYVGDRIGRALTH
FQQSLIIWQQLALENESDNLNQTIPNTWTTELDILSNHTSPLVRQGVLLYYLGLCYSRLA
EQNQIENRRCWDESKAYLQQSCNVLQLAQRPDIVAEFISQLAEVLEHLQEWSELQTVAQK
SLELHQIYGSQIQLACDYGFLAQVALQQSRWMQASILAHVSLLKLGEAQRQGASHQYLFP
LLLAQIYYLILAEAQQSLGDHKIANEYLDKAAKELPNALENSAHQYNAHRYIRLLRTLRS
LYFAAGRYLEAYTIRQKRRSVEQQYGFRAFIGAGRLQPQRQATNPALMSPSGTSSVALEI
AASGREGDINNLIGKISRTDQKLMVIHGQSGVGKSSTVSAGLVPALQNRTVGDQIAVPVV
IQVYTDWVREFGKALTAAMSQVNGEEALEVAASDSNVPTTTADILAQLTANANNHLITVL
IFDQFEEFFFTCIQLAQRQEFDRFLRDCLNISFIKIVFSLREDYLYRLLEFRNLSALEAI
DYNILDKNIRYQLNNFSPEYAKVIIQKLTERSQMSLEPALIDALVADLSADLGEVRPIEL
QVVGAQIQDERINTLAQYQPYRPNKLIERYIRELIKDCGPENERAALLVLYLLTDETNQR
PFKTRAELATEIAELEDASKLELVLNILVSSGLVVLFPDVPERYQLIHDYLVDLIRYLQE
QESSLQVKLDQLRHKVDQSESEIERLKSELRQKKQQVRLPEVQPQQSLDLVTELRELRKR
EELSQLEIEQLRSVLKEKELTAQLAATQEKQRLNETRLNRSLKVALSVAFLAIFGLSVSI
ITVLDSEIKTLSVSSEALFASQKGIDALKEGIKAGRKLQQALWVDSSTRQQVQTALYQAV
SGVREFNRLESHTGGVNSAVFSGDRALIVSGSADNSIKLWRTDGTLLKTLWGHQDIVNSV
SFSPDGHTIASGSQDMTVRLWSREGKPLKTLQGHTAVVNSVSFSPDGQIIASASTDNSVK
LWSRDGKLLRTLTGHQSSVLDVAWSPDNQTLASASADKTIKLWNREGKVLKSWQAHNDAV
KSLAWSPDSKTLVSGSLDQTIKLWNLQGQLIRTVSGHTAEITSVSFSPDGHTIASASLDQ
TVKLWNPQGLLLGTLRGHNNWVNSVSFSSDSRTLISAGRDKTVKLWRWDNVLLRNPESDQ
ADWITSISFSPDSRNIAAASRDSTVKILNSTGELLRTLQGHQGQVWGVAWSPDGQNIVSA
SKDKTVKIWQRDGKLLHTLTGHRDTVLGVAWSGDGRIIASASKDAAVKLWSRDGKLLHTL
KGHRDAVNWVDFSPDGKLLASASDDKTVIIWSRDGKRQKTLNRHNSPVNGVAWSTDGKIL
ASASIDSTIKIWSRDGQLLNDIPGDGDSFISVNFSHDSKTIVAASDDKLKLWNRDGTLLI
ALKGDKDELTSVTFSPDGKILAAGSGKGMVIFRTLADIKLEHLLTMGCDLLHDYFQTNPK
VSQSDRALCFRY
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacacacacaagcagacataaaatctgctaaccagagggcgttgcggagttta
agcagagcgatttctctgtcacggggacaattctcggtagttttggtgtgttgcaactat
cgcgtcttgcaagcacaaatactgcaacaattagaagcatcttctctaggctcaatcaaa
caactcgttttaccccacaatgcgagaagtctttacagcaccattcatgttcagctgcgt
actgatgaacagcaaccagctgcattaaatatcttgggtttagagtcagtagaacggatt
gatgacttactgagttcaataaatcaaatccgcgatgaatttcctaaacgtcattcattc
ccgatgattttttgggtgaatgatcaagtcttgcaaaaagtcgtgcgtttagcgccagat
tttgcgagttgggcggcgacaccaattcgttttgaaatgacaacaactcaattacaagaa
tttttgcgtcaagaaacagactctttatttgcgacagttttaccgacacagcatcaagat
aatcaaggtacacactctaccttagagcaagtctgggaacataacgatgaactccactgt
gcaattcaagagttgcgccagcgggggattaccttagaaccagaactatacgccagttta
gaatttgtttttggtttagataattatgttggcgatcgcattgggcgagccttaactcat
tttcaacaaagcttaataatttggcaacaattagcattagaaaatgagtcagataatctt
aaccaaacaattcccaatacctggactacagaattagatattctgagcaatcatacttcg
cctttagtgcgccaaggagtattactttattatttaggattatgttattctcgcctcgcc
gagcagaatcaaattgaaaaccgccgctgttgggatgaatctaaagcttatttacagcaa
tcatgtaatgttttacagttagcgcaacgaccagatatagtcgctgaatttattagtcaa
ctcgcagaagttttagaacatctacaagaatggtcagaattacaaactgtagctcaaaaa
tctttagaactacatcaaatttatggtagtcaaattcaacttgcttgtgattatggtttt
ttagcccaagtagctttgcaacagtcgcggtggatgcaggcgagtattttagctcatgta
tctttattaaaattaggagaagcccaaagacaaggcgcttctcaccaatatttatttccc
ttattgttggcgcaaatttattatttaattctagcggaagcccagcaaagtttaggcgac
cataaaattgccaacgaatatttagataaagccgcgaaagaattacccaatgctttagaa
aacagcgcccatcaatataatgcccatcgttatattcgcttattgcggacactgcgatcg
ctttattttgccgctgggcgatatctggaagcctacactatcagacaaaaacggcgttct
gttgaacagcaatacggctttcgggcttttattggggcgggacgcttgcaaccccaaaga
caagccactaacccagccttgatgtcaccctctggaactagcagcgtcgccctagaaatt
gcggcttccggtcgagaaggcgatattaataacttaattggcaaaattagccgcactgac
caaaagctgatggtaattcacggtcagtcaggcgtaggtaaaagttccaccgtcagcgct
ggactagtaccagcattacaaaatcgtaccgtaggcgatcaaattgccgtacctgtagtt
atccaagtttacacagattgggtacgagaatttggtaaagctttaactgcggcgatgtct
caagttaacggcgaagaagctttagaagtagccgcatctgacagcaacgtccccacaact
accgccgatattttggcacaattaaccgcaaatgcgaataatcatttaattacagtttta
atttttgaccaatttgaagaatttttctttacttgtattcaattagctcaaaggcaagaa
tttgatagatttttgcgagattgcttgaatatttccttcattaaaattgtcttttccctc
agagaagattatttatatcggctgttagaatttagaaatttatcagccttagaagcgata
gattataatatcctcgataaaaatattcgttatcaattaaataatttttcacccgaatat
gccaaagtcatcattcaaaagttaactgagcgatcgcaaatgagcttggaaccagcttta
atagatgctttggttgcagatttatcagcagacttaggagaagtcagaccaattgaatta
caagttgtcggcgcacaaatccaagatgagagaattaatactttagcgcaatatcaacca
tatcgaccgaataaactaattgaacgttatattagggaattaatcaaagactgcggcccc
gaaaatgaacgagcggctttactagttttatatttactcaccgatgaaactaatcaaaga
ccttttaaaactcgtgccgaattagccacagaaattgccgaattagaagatgcgagtaag
ttagagttagtcttaaatattttagtcagttctgggttagtagtgttgtttcctgatgta
ccagaacgttatcaattaattcatgattatttagtagacttaattcgttacttacaagaa
caagaatctagtttacaagtcaaacttgatcagctacgccacaaagttgatcaaagtgag
tcagaaattgagcgactcaaaagcgaactccgccaaaaaaagcaacaagttagactcccc
gaagttcaaccacagcaaagtttagatttagtcacagaactgcgagaattacgcaagcgg
gaagaattaagtcagttagaaattgaacaattacggtcggtgctgaaagaaaaagaatta
acagcacaattagcagcaactcaagagaaacaacggcttaacgaaacgcgattaaatcgt
tcgttgaaagttgctttatcggtggcatttttagctatctttggtttatcagtttctatc
atcacagttttagacagcgaaattaaaaccctgagtgtttctagtgaagctttatttgct
tcccaaaaaggcatcgatgctttaaaagaaggaataaaagctggtagaaaattacaacaa
gctttgtgggtagattcttcaaccagacagcaggtgcagacagcactttatcaagcagtt
tcgggcgtgagggagtttaatcggttagaaagtcatacaggtggtgtcaatagtgcagta
tttagtggcgatcgcgctttaattgtctccggtagcgccgataatagcattaaactctgg
cgtaccgatggtactttgctcaaaaccctttggggacatcaagatatcgtcaatagtgta
agttttagtcctgatggtcatacaattgcctctggtagtcaagatatgaccgtcagatta
tggagtcgggaaggtaaaccactcaaaactctccaaggtcatacagctgtagttaatagt
gtaagttttagtcctgatgggcaaattattgcctcagccagtactgacaacagcgtgaaa
ttgtggagtcgtgacggtaaattactccgcaccttaactggacaccaaagttctgtttta
gatgtcgcttggtcgcccgataatcaaactctagcttccgctagtgctgataaaactatc
aaactgtggaaccgggaaggtaaagtactgaaaagttggcaagcacataatgatgcagta
aaaagcctagcttggtcgcccgacagtaaaactcttgtttccggcagtttagatcaaaca
attaaactatggaatcttcaaggtcaactcatcagaactgtttctgggcatacagcagaa
attaccagcgttagttttagtcccgatggtcatacaattgcttcagctagtcttgaccaa
actgtgaagttatggaatccgcaaggtttactgttgggaaccctcagaggtcataacaat
tgggttaatagtgtaagttttagttctgacagtcgaactttaatttccgctggtcgtgac
aaaactgtaaagctgtggcgctgggataatgtgctgctacgtaaccccgaaagtgaccaa
gcagactggattacgagtatcagttttagccctgatagccgcaacatcgccgccgctagt
cgtgattccaccgtcaaaatattgaatagcacaggggaacttttacgcaccttacaaggc
catcaaggtcaagtttggggtgtagcttggtcgcctgatggacaaaacattgtctcagcc
agtaaagataaaacagtcaaaatttggcagcgtgatggcaaactactgcatacattaaca
ggacatcgagatactgtactgggtgtagcttggtctggtgatggtcgaatcatcgcctcg
gctagtaaggatgcagccgttaagctttggagtcgggatggcaaactgctgcacacctta
aaaggacatcgagatgcggtgaattgggtggattttagtcctgacggtaaattgttagcc
tcagccagtgatgataaaaccgtcattatttggagtcgggatggaaaacgacaaaaaacc
ttaaaccgtcataacagtccagtaaatggtgtcgcttggtcaactgatggtaaaatttta
gcttccgctagtattgatagcacgattaaaatttggagtcgagacggtcaactactcaat
gatattcctggagatggggatagtttcattagcgtgaattttagtcatgatagcaaaaca
atagtagctgccagcgatgataagctcaagctatggaaccgagatggaacgttactgatt
gcgctcaaaggcgataaggatgaattgaccagtgtgacttttagcccagatggtaaaatt
ttagccgcaggtagcggtaaaggtatggtaatttttcggacgttagcagatatcaaacta
gagcatttgctaacaatgggttgtgatttgctgcatgattatttccagactaaccctaaa
gttagtcagagcgatcgcgctttatgttttaggtattga
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integrated database retrieval system