Nostoc sp. PCC 7107: Nos7107_3619
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Entry
Nos7107_3619 CDS
T02362
Name
(GenBank) putative exonuclease, RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nos
Nostoc sp. PCC 7107
Pathway
nos03410
Base excision repair
nos03430
Mismatch repair
nos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nos7107_3619
03430 Mismatch repair
Nos7107_3619
03440 Homologous recombination
Nos7107_3619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nos03400
]
Nos7107_3619
DNA repair and recombination proteins [BR:
nos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Nos7107_3619
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Nos7107_3619
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Nos7107_3619
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Cac1_C
Motif
Other DBs
NCBI-ProteinID:
AFY44186
LinkDB
All DBs
Position
complement(4207245..4209575)
Genome browser
AA seq
776 aa
AA seq
DB search
MTNDQTQWLLAPTEQPPEWFIAAVKQYTPSSSGLYAAQLLWQRDIKNIQQLAAFVNYQTY
QPASPFEFGAEMHLAIARLQQARSLGEKVAIWGDFDADGITSTAVLWDGLGQFFQQHSQL
TYYIPNRLRESHGLNNSGIDNLAKQNFKLIVTCDTGSTNIDEIIYAKQLDIDVIVTDHHT
LPAERPPVTAIINPRYLPSVHPLFNLSGVAVAYKLIEALYQTLPNVPQDALENLLDLVAV
GLIADLVQLKGDCRYLAQLGIQRLQADFKQLPTARRRPGVGRLLELCQKSGDRPTDISFG
LGPRINAVSRIQGDASFCVELLTSRDAKHCNQLAEVTELANTRRKSLQKDVQAQVVQKLS
QLDLSTTSVIVLEDPQWPAGVLGLVAGQVAQETGRPTILLSTEESLDNSIPLARGSARSI
NSVDLYQLVKDQAHLLHRFGGHPYAAGLSLPVENIPLFTQAINQQLRQSSGSTELIPTVQ
ADLTVTVADLGKELFLELKLLEPCGMGNPAPKLLIQNCWFENAWHRNQQDWQGKKVQYIK
TDFDIRDDSTKNFFPGVWWGHYKDELPIGKADCIVELDYNSFKKRYEIRLIAVRPSANSE
LNQQQSTQILDWRNQDYSVLPTPHSPLILEQCPTSWDELRAWWQRSLYNSQQLALAWSKL
HLQPPQEIWFTLVGIAKYLSRTQQLVNRTQLLEKLGIGNSSLLLGIKALKYCGFIVTRQD
RSLQISQNPQTISANLADAAVTQFLAAVSEEQFQRQYFSEVPLSTIVAIINRPLPF
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgaccaaacacagtggcttttagccccaactgaacaaccaccagagtggttt
attgcagcagtcaaacagtatacaccttcatctagtggactatatgctgcacaattatta
tggcaaagagatatcaaaaatattcaacaactagcagcttttgttaactatcaaacttat
caacctgctagtccctttgaatttggagcagaaatgcacctagcaatagccagattacag
caagcgcgtagtcttggtgaaaaagttgctatttggggagattttgatgctgatggtatc
acttctactgctgtgttatgggatggtttagggcaattttttcagcaacatagtcagtta
acttattacattcccaatcgcctaagagagtcccacggactgaataattcaggaattgat
aatttagcaaaacaaaattttaaattaatagttacttgtgatactggtagcacaaatatt
gatgaaattatctatgctaaacagttagatatagatgttattgttacagaccatcacacc
ttacctgcggaacgtccaccagttacagcaattattaatccccgttatttacccagcgtt
catcctttatttaatctttctggggtagcagtagcttacaagttaatagaagctctttat
caaactctgccaaatgtcccacaagatgcactggaaaatttattagatttagtcgcagta
gggttaattgccgatttggtgcaactcaagggagattgtcgatatttagcacaattggga
attcaacgtttacaagcagactttaaacaacttccaaccgcacgaagacgaccaggtgta
gggcgattattagaattgtgccaaaaaagtggcgatcgccccacagatatttcctttggt
ttagggccacgcatcaacgcagttagccgcattcaaggcgatgcgagtttttgcgtagaa
ttattgaccagccgcgatgctaaacactgcaatcaattggctgaagttacagaacttgcc
aacactcgccgcaaatcattacaaaaagatgtacaagcccaagtagtccaaaaactctcc
caattagatttatcaaccaccagcgtcatcgtcctcgaagatccccaatggccagcaggc
gtgttaggcttagtcgccggacaagtagcccaagaaacaggccgtcccacaattttgtta
agcacagaagagagtttagacaattccattcccctagcaagaggttcagcccgttccatc
aattctgtcgatttatatcaactagtcaaagaccaagcacatttattacatcgctttggt
ggacatccctacgccgcaggcttgagtctaccagtagaaaatattcctttatttacccaa
gcaatcaatcagcagttgcggcaatcttcgggtagtacagaattgatacctacggttcaa
gcagatttaacagtgaccgtagctgatttgggcaaagaattatttttagaactgaaactg
ttagaaccttgcggtatgggaaacccagccccaaaactactcatccaaaactgctggttt
gaaaacgcttggcatcgcaatcagcaagactggcaaggaaaaaaagtacagtacattaaa
acagattttgatattcgggatgactctactaaaaatttttttcctggtgtgtggtgggga
cattataaggatgaattacctataggcaaagctgattgcatagttgaactagattacaac
agtttcaaaaaacgctatgaaatcagattaatcgccgtccgtcccagtgctaactcagaa
ttgaatcaacaacaatcaacacaaatcctagactggcgaaatcaagattactcagtactt
cccactccccactctccactcatccttgaacaatgccccactagctgggatgaattacgt
gcttggtggcaacgctctctttataatagtcaacaattagcccttgcttggtctaaactt
cacctccaaccaccccaagaaatttggtttaccttggttggtattgccaaatatctgagt
cgtacacagcagctagttaaccgcacacaactactagaaaaattaggtataggtaattca
agcttgcttttaggaatcaaagctttaaaatattgcggatttattgtcacaagacaagac
cgttctttacaaatcagccaaaatccccaaacaatttccgccaacctagcggatgcagcc
gtcactcaatttttagccgcagtcagcgaagaacaatttcagcgacagtatttttctgaa
gtacctttatctactattgtggcgattattaatcgacctctgcctttttaa
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