Nostoc sp. PCC 7107: Nos7107_3874
Help
Entry
Nos7107_3874 CDS
T02362
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nos
Nostoc sp. PCC 7107
Pathway
nos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nos7107_3874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nos03019
]
Nos7107_3874
03400 DNA repair and recombination proteins [BR:
nos03400
]
Nos7107_3874
Enzymes [BR:
nos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nos7107_3874
Messenger RNA biogenesis [BR:
nos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Nos7107_3874
DNA repair and recombination proteins [BR:
nos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nos7107_3874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFY44432
UniProt:
K9QI08
LinkDB
All DBs
Position
4535823..4537265
Genome browser
AA seq
480 aa
AA seq
DB search
MNQPVTTSWQDVRAAFQKIWGYDDFRSPQGEIISTLLTQKDALIIMPTGGGKSICFQLPA
LLQTGLTLVVSPLVALMENQVEELRQRNLSAALLHSELPSSQRRATLQALEKQKLRLLYL
SPETLLSPPVWERLSQPQLQINALILDEAHCLVQWGETFRPAYRRLGAVRPALLKSKPPG
TKISIAAFTATADPLAQNIIQTVLQLHKPEIFRLNPYRPNLHPSVSIAWTPRGRKQQLLQ
FIEKRSPQAGLIYVRTRRDSEDLAAWLTQIGYATASYHAGLGASERRAVEASWLGGKIPF
VVCTCAFGMGINKPDVRWVIHYHAPHLLSEYVQEIGRAGRDGKPAEALTLVSEPTGWLDS
GDKQRQQFFADKMRSQLQTAQQLVKKLPKQGEVNAVTRQFPDAAVALALLHSSGQLNWLD
PFHYSINSKVQKQPPTQLQAVKQIQQYLTTKQCRWQFLLNAFGFTQEASNWRCGHCDNCS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacccgtaacaacatcttggcaggatgttcgtgcagccttccaaaaaatctgg
ggttacgatgattttcgttcaccgcagggagaaataatcagcactttattaacacaaaaa
gatgctctgattatcatgccaacaggcggaggtaaatcaatttgttttcaattaccagca
ttattacaaacaggattaacattagtagtttctcccttggtagcactgatggaaaaccaa
gtagaagaactacgtcaacgcaatctgagtgcagcacttttgcatagtgaattaccttca
tctcaacgccgtgcaacgctgcaagcactagaaaaacaaaaattgcgcttactttatcta
tcaccagagactttattaagtccgccggtttgggaaagattatctcagccacaattgcaa
atcaacgccttaattcttgatgaggcacattgtttagtgcaatggggagaaacatttcga
ccagcttaccgcagattaggggcggtgcgcccagctttactcaaatcaaaaccaccggga
acgaaaatcagtattgcggcttttactgcaaccgcagacccattagcccaaaatattatt
caaacagttttacaattacacaaaccggaaatttttcgtcttaatccttatcgtcctaat
ttacatcctagtgttagtatcgcttggacaccacgaggcagaaaacaacagttactccag
tttatcgaaaagcgatcgccacaagcaggcttaatttatgttcgcacccgtcgagatagt
gaagatttagccgcatggttaactcagataggttacgctacagccagttatcatgctggc
ttaggtgcaagtgaacgccgtgcagtcgaagccagttggttaggtggtaaaatccccttt
gtcgtttgtacctgcgcctttgggatggggataaataagcctgatgtgcgttgggttatc
cactatcacgccccacatttgctatctgaatatgtgcaagaaattggccgtgctggccga
gatggtaaaccagccgaagcactaacattagtgagtgaaccgacaggatggttagattcc
ggagataaacaaagacaacagttttttgctgataaaatgcgatcgcaactccaaacagca
caacaattagtcaaaaaattgccaaaacaaggcgaagtcaacgcagttacgcgccaattt
cccgatgcggctgtcgcacttgcattactccacagcagcggacaactaaactggcttgat
cctttccattattctattaattcaaaagtgcaaaaacagccaccaacacaattacaagct
gtcaaacaaatacaacaatatttaacaacaaaacaatgtcgttggcagtttttattaaat
gcctttggtttcactcaagaagctagtaactggcgttgtggacattgcgataattgtagt
taa
DBGET
integrated database retrieval system
