Nostoc sp. PCC 7107: Nos7107_4071
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Entry
Nos7107_4071 CDS
T02362
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nos
Nostoc sp. PCC 7107
Pathway
nos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nos7107_4071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nos03021
]
Nos7107_4071
03400 DNA repair and recombination proteins [BR:
nos03400
]
Nos7107_4071
Enzymes [BR:
nos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nos7107_4071
Transcription machinery [BR:
nos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Nos7107_4071
DNA repair and recombination proteins [BR:
nos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Nos7107_4071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AFY44622
LinkDB
All DBs
Position
complement(4754220..4758284)
Genome browser
AA seq
1354 aa
AA seq
DB search
MTNENKVFRNRVVDKGQLRNLISWAFTNYGTARTAVMADKLKDLGFRYATRAGVSISVDD
LMVPPSKRSLLEAAEEEIRATEARYQRGEITEVERFQKVIDTWNGTSEALKDEVVVHFKK
TNPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIIS
SYGARKGLVDTALRTADSGYLTRRLVDVSQDVIVREFDCGTSRGLALQSMTEGSKTLIPL
ATRLMGRVVGEDIVHPTTKEVIAPRNTPISDDLAKIIQKAGVTQVVVRSPLTCEAARSVC
QHCYGWSLAHAKMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVAQQVRSKMAG
TVKIPRKLRTRPYRTRHGEDALYVEANGILMLEPKKEGSETPVAQEIQVTQGSTLYIVDG
QQVKLGQLLAEVAIGGRTTRTNTEKAVKDVATDLAGEVKFADVVAEQKTDRQGNTTTTAS
RGGLIWILSGEVYNLPPGAELVVNNGDRIATNGVLAETRLTSQHGGVVRLPEATPGKSTR
EIEIITASVVLDQAAVTVNSSQGRNNYLISTGNNQEFNLRATPGTKVQNGQVVAELIDDR
YRTTTGGFLKFAGLEVQKKGKAKQGYEVVQGGTMLWIPEETHEVNKDISLLLVEDGQFVE
AGSEVVKDIFCQNSGVVEVTQKNDILREVVVKPGELLMVDDPEAVIGRDNTFVQPGEELL
GQTFTELRYIQYVESPEGPALLSRPVVEFAVPNTPDVPSTTSVSQQTGRSIQLRAVQRLP
YKDAERVKSVEGVELLRTQLVLEIEQEGEQDHNASPLAADIELVPDLQDPDIQRLQLVIL
ESLVIRRDIVADATQGSTQTALQVQDGETIAPGAVVASTQILCKEGGIVRGVQKGTETVR
RCLVLRHSDMISMTTASKPKVKVGDLMVEGAEITPGVFAEESGEIVDIKAVAPASAGDES
ALSTQKYTVTIRAGRPYRVSPGAVLQIEDGDLVQRGDNLVLLVFERAKTGDIIQGLPRIE
ELLEARKPKEACVLIRRAGEVKVVYGDGDEAIAVKIVESNGVISDYPLGPGQNLIVPDGY
HVLAGQPITDGPSNPHEILEIFFSLGSEDGVYACASHALQKVQTFLVNEVQLVYQSQGID
IADKHIEVIVRQMTNKVRIDDGGDTTMLPGELVELRQVEQVNEAMAITGGARAQYTPVLL
GITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGYNTYD
EPGAIEDYATLDTTSVLDEVDDPLDMVLDDRTARAYNLDTPSLTEGTYGSRRTGSILDED
DLILDGVHEVHDLVSDDEEDEYEEVDDDEDDFDM
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgaaaataaagtttttcgcaatcgcgtagttgacaaaggtcaattgagaaat
ttaatttcttgggcgtttaccaactacggtacggcgcgaactgctgtaatggcagacaaa
ctgaaagatttaggtttccgttacgctactagagccggggtttccatcagtgtagatgat
ttgatggtaccacctagcaagcgcagtcttctagaagccgcagaagaagaaattcgggcg
acagaagcgcgttaccaaaggggagaaatcacagaagttgaacgtttccagaaagtaatt
gacacctggaatggtaccagtgaagctctcaaagatgaggtagttgttcacttcaagaaa
accaatcccctcaactccgtgtacatgatggcgttttctggggcgcggggtaatatttcc
caagtccgtcagttagtcgggatgcggggactgatggcagatccccaaggggaaattatt
gacttaccaattaaaaccaacttccgggaaggtttgactgtcacagaatatattatttcc
tcttacggtgcgcgtaaaggattggtagatacagcgctacggacggctgactctggttat
ctaacgcgccgtctggttgacgtatctcaggatgtgattgttcgagaattcgattgtggt
actagcagaggtctagccctacagtcgatgacagaaggtagcaaaaccttgattcctctg
gccacacgtttgatgggacgagtagtgggagaggatatagtgcatcctacaaccaaagaa
gtaattgcaccacgcaacacccccatttctgatgacttggcaaaaataattcaaaaagct
ggggtaacacaagtggtggtgcgatcgcctctgacctgtgaagcggcacgttctgtttgt
caacattgctacggctggagcttggctcacgccaagatggtagacttgggcgaagcagtg
gggatcattgctgcccaaagtatcggtgaacctggtactcagctaaccatgcggacattc
cacaccgggggtgtatttacaggggaagtagcacaacaagtgcgttcaaaaatggctggg
acagtcaagattccccgcaaattgcggacaagaccctaccgtacccgccacggggaagat
gctttgtatgtggaagctaacggcatcttgatgttagaacccaagaaagaaggttcagaa
acgccagttgcccaagaaattcaagttacccaaggttccacactatatatagttgatggt
caacaggtaaaactaggacagttactagcagaagtcgcaattggtggtcggacaactcgt
accaacaccgaaaaagcggtcaaagatgtggccactgacttagccggagaggtaaaattt
gctgatgtcgttgctgaacaaaaaacagaccgtcaaggtaacaccacaaccaccgcatca
cgaggtggtttgatttggattttgtctggggaagtttataacttgccccctggtgcagaa
ttggtggtgaataatggcgatcgcatcgccacgaacggcgttttagccgaaaccaggctc
accagtcagcatggtggtgtggtgcgtttgccagaagctactcctggtaagagtaccaga
gaaattgaaatcatcactgcttcagtagttttagaccaagcagcagttaccgttaacagt
tctcaagggcgaaacaactacctcatctccacgggcaacaaccaggaattcaacctccga
gctaccccaggcacaaaagtgcagaatgggcaagtagtagccgaattaattgatgaccgc
tatcgcactaccaccggtggctttttgaaattcgctggactagaagtccagaagaaaggc
aaagccaaacaaggttatgaagtggtacagggaggcacaatgctgtggattcccgaagaa
acccacgaggtgaataaagatatctccttgctgttggttgaagatggtcagtttgttgaa
gctggctcggaagttgtgaaagatatcttctgccaaaacagcggtgtagtagaagttacc
cagaaaaacgacattctgcgggaagtggtagttaaacccggcgaactgctcatggttgat
gatccagaagcggtcattgggcgggataacacctttgttcagcctggtgaagaattgttg
ggacaaacctttacggaattgcgctacatccagtatgtagaatctccagaaggcccagcc
ttgttaagtcgtcctgtcgtagaatttgccgtacccaacaccccagatgtaccttccacc
acatctgtgagtcagcaaaccggacgttcaattcaactgcgagcagtacagcgtctacct
tacaaagatgctgaacgcgtcaaatcagtagaaggcgtagaactgttacgtactcaacta
gtattggaaattgagcaagaaggtgaacaagaccataatgcttctcctttagcagcagat
attgaattggttcctgatctacaagatccagatatacagcgtttgcagctagtaattttg
gaatcattagtcattcggcgggacattgttgctgatgctacccaaggtagtactcagaca
gcgctgcaagtacaagatggcgaaaccattgctcctggtgctgtagtcgccagtacccaa
atcttgtgtaaagaagggggtattgtcaggggtgtacaaaaaggtacagaaactgtacgc
cgttgcttagtattgcgtcacagcgatatgatttcgatgacgactgcctctaaacccaag
gtaaaagttggtgatttgatggtagaaggtgccgaaattactccaggcgtatttgcagaa
gaatctggggaaattgtagatattaaggctgtggctccagcatcagctggtgatgaatca
gccctgagtacacagaaatatactgtaactattcgtgctggtcgtccctaccgagtcagt
cctggtgcagtgttgcagatagaagacggtgatttagtacagcgcggtgataacttagtg
ctgttggtatttgaacgtgcgaaaaccggagatatcattcaaggtttgccccggattgaa
gaacttctagaagctcgcaaaccaaaagaagcgtgcgtcttaatccgccgtgctggggaa
gtcaaggttgtttatggtgatggcgatgaagcgatcgctgtgaaaattgtagaatctaat
ggtgtaatcagcgactatccccttggcccaggacaaaacttaatagtacctgatggttat
cacgtcttagccggacaaccaatcactgatggcccctctaacccccacgaaattctagaa
atcttcttcagcttgggttctgaggatggagtctatgcttgcgccagtcatgctttgcag
aaagtgcaaacattcttggtaaacgaagtacagttagtgtatcagtcccaagggattgat
attgccgacaaacacatcgaagtgattgtccgccaaatgaccaacaaagtgcggatagat
gatggtggagataccaccatgctgcctggggagttggtagaattgcgccaagttgaacaa
gtcaacgaagcaatggccattacaggtggtgctagggcgcaatacacacccgtactgttg
ggtatcaccaaagcatccttgaacaccgatagctttatctcggctgcatccttccaagaa
accaccagggtcttaacggaagcagcaattgaaggcaaatctgactggctgcggggtctg
aaagagaacgtaattattggacgcttgattccggcgggtactggatacaatacttatgat
gaaccaggtgcgatcgaagattacgcgactctggacactaccagtgttctggatgaagta
gatgatccactagatatggtgttagacgatcgcactgctcgtgcctacaatttagataca
ccttcgctaaccgaaggtacttatggtagccgacgcacaggctcaatcttggatgaagat
gatttgattcttgatggagtccatgaagttcatgacctcgtatccgatgacgaagaagat
gaatatgaggaagttgacgatgatgaagatgatttcgatatgtaa
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