Nostoc sp. PCC 7107: Nos7107_4438
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Entry
Nos7107_4438 CDS
T02362
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nos
Nostoc sp. PCC 7107
Brite
KEGG Orthology (KO) [BR:
nos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nos03400
]
Nos7107_4438
DNA repair and recombination proteins [BR:
nos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nos7107_4438
Archaeal homologous recombinant proteins
Nos7107_4438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
Rad50_zn_hook
AAA_27
SbcC_Walker_B
AAA_29
AAA_21
CCDC-167
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFY44972
LinkDB
All DBs
Position
5174197..5177223
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLILKNFLSYRDATLDFRGLHTACICGSNGAGKSSLLEAITWAIWGESRASTEDDV
IHAGAKEVRVDFTFHTNQQKYRVIRTRIRGATSVLEFQIETPSGFRPLTGKGVRATQDLI
LEHIKLDYDTFINSAYLRQGRADEFMLKRPTERKEILSELLKLTQYDDLEERAKESSRQF
KARAEELERSLESIKTQLQQRELTETQRAELEAELNQLQQVQAFENIQLQSLQVVQHQRQ
NWEQQLSFVRQQYQNLTQDCDRLHQEQSSVKTQLADLTAILNQEAEIKNGYAHYQNLQSQ
EEAFAAKFEQHTRATSLRQQKQQQLTGQIHEIERQLQQVQAQLEALAQQEQEIQQTLSKS
GEVEVALGQLSAARRRVAQLDELQMQVSPLLQQRQSLQSHLDRIQASLVARLEQIQATEN
KLQRSSQRYPELQQAVMAVAMQIEQMEKDKVYLQRIQEKGQERRHFIERLQAQQREYERL
LGELDQKLQMLRNPDAICPLCERPLDEHHWNRVADKTKAEYKDTEEQLWVFREQMACTDR
EIQVLRQKYREVSQNLSPYDSLREQRGQLAAQLESTSDAEEQLQQLTQERQHLERSLQVG
DYAHDKQQELRQVEEYLRQLNYNEQDHALARSEVERWRWAEIKQGQIKDALKRQTQLAAR
KPELQATITQLQTRIQQEQTDSDSAKQIAALERQIAEIAYSSEQHNNLRQAVRQGQAWQL
RYQQLLSAQQQYPQLQGRLQELEAAKTTRLNERQKLATQIDEIVQQLAQSANPIEQIQAL
EQQLVIRRRQLDEQIAKLGRLEQLAHQLETLQAQYEEQQQQLQACKKQYRVYHELALAFG
KNGIQALMIENVLPQLEAETNQLLSRLSANQLHVQFVTQRAGKSSKSSKKNAKLIDTLDI
LIADAKGTRAYETYSGGEAFRINFAIRLAMAKLLAQRAGAALQLLIIDEGFGTQDAEGCD
RLIAAINAIAADFACILTVTHMPHLKEAFQARIEVNKTQQGSQVQLLG
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtacaacttatcctcaaaaacttccttagttaccgtgatgctactttagat
tttcgtggtttgcatacggcttgtatttgtggctctaatggcgcaggtaaatcgtctcta
ctcgaagcgattacatgggcaatttggggtgaaagtcgtgcttcaactgaagatgatgtc
atccatgctggggcgaaagaagtccgcgttgatttcacttttcacactaaccagcaaaaa
tatcgagtaattcgcacaagaattcgcggtgcaactagtgttttagaatttcaaattgaa
acaccttctgggtttcgtcctctcacgggtaaaggagtaagggcaacccaggatttgatt
ttagaacatatcaagctggattacgatacttttattaattctgcttatttgcgtcaaggt
cgtgctgatgaattcatgctgaagcgcccgacagaacgcaaggaaattttatcagagttg
ttaaaactaacccagtatgatgatttggaagaacgagctaaagaatcttctcgacaattc
aaagctagagcagaagaattagaacgttctttggaatcgattaaaacacaactgcaacag
cgggagttgacagaaactcaaagggcagaattagaagcagaactgaatcaactgcaacaa
gtacaagcttttgagaatattcaattacaaagtttacaagttgtccagcaccagcggcaa
aattgggaacaacaactcagctttgtcaggcaacaatatcagaatttaacccaagattgc
gatcgcctccaccaagaacaatcatccgttaaaacccagctggcagatttgacggctatc
ttaaatcaggaagcggaaattaaaaacggttacgcccattaccaaaacctgcaatctcaa
gaagaagcttttgcggctaaatttgagcaacacacccgcgccactagtttgcgtcaacaa
aaacagcagcaactaactgggcaaattcatgagattgaaagacaactgcaacaagtacaa
gcgcaacttgaagccttagcccagcaagaacaagaaattcagcaaactctgagtaaatca
ggcgaagtcgaagtggctttaggacaactcagcgccgcccgtcgtcgggttgcacagttg
gatgaattacaaatgcaagtttcgcctttattacaacagcgccaaagtttgcaaagtcac
ctagatagaattcaagctagtttagtcgccagattagaacaaatccaagccacagaaaat
aaactgcaacgttcttcacaacgttaccccgaactgcaacaagcagtgatggctgtagca
atgcagattgaacaaatggagaaagataaagtttatttgcaacgcatccaagaaaaaggc
caggaaagaagacactttattgaacgactacaagcacagcaacgggaatatgaaaggtta
ttgggtgaattagaccaaaaactgcaaatgttgcgtaatcccgatgcgatttgtcctttg
tgcgaacgtcctttagatgaacatcactggaatcgagttgcagataaaaccaaagctgaa
tacaaagacactgaggaacaattgtgggtatttcgggaacagatggcttgtacagatcga
gaaattcaagtactcaggcagaaatatcgagaagtatcccaaaatctttctccttatgat
tctttgcgagaacagcgcggacaattagccgcccaactagaatcaacaagcgatgctgaa
gaacagttacaacaactcacacaagaaagacaacatttagagcgatcgctccaagttggt
gattacgcccacgataaacaacaagaactgcggcaagtagaagaatatctgcgacaatta
aattacaatgagcaagaccatgccttagcgcggagtgaagttgaaagatggcgctgggca
gaaatcaagcaagggcaaattaaagatgcgctcaaacgtcaaacccaactagccgcccgc
aaaccagaattacaggcaactatcacccaattacaaactagaattcagcaagaacaaact
gattctgactccgccaaacaaattgccgcccttgaacgtcaaattgcggaaattgcttat
agttccgagcaacataataatttacgtcaagccgtccgccaaggccaagcttggcaatta
cgctatcaacaattgttatcagcccagcagcaatatccccaactacaagggagattacaa
gaactagaagcggcgaaaactactcgcttaaacgagcgacaaaaactcgccacccaaatt
gatgaaattgtccaacaactagcccagtcagccaacccaattgagcaaattcaagcttta
gaacagcagttagttatccgcaggcgacaacttgatgaacaaatcgccaaattagggcgt
ttagaacaactcgcccatcaattagaaaccttacaagcgcagtacgaagaacaacaacag
cagttgcaagcttgcaaaaaacagtaccgtgtttaccatgaattagcattggcgtttggt
aaaaatggtatccaagcattgatgattgaaaatgtactgccgcaattagaagccgagaca
aatcaacttctatcacgattgagtgccaatcaactgcacgtacaatttgttactcaaaga
gcaggtaaaagtagtaaatcaagcaaaaagaatgccaagctgatcgataccttagacatt
ttaattgccgatgctaagggaacacgggcttatgaaacatattccggtggggaagcattt
agaattaactttgccatccgtttggcaatggcgaaattattagctcaacgggcgggtgcg
gcgttgcaattgttaattatagatgaaggctttgggacacaagatgccgaaggatgcgat
cgcctgattgcggccataaatgcgatcgctgctgattttgcctgtattctcacagtaact
cacatgccccacctcaaagaagcctttcaagccagaattgaggtgaataaaactcaacaa
ggttcacaggtgcagttgttgggttag
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