Nostoc sp. PCC 7107: Nos7107_5038
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Entry
Nos7107_5038 CDS
T02362
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K03090
RNA polymerase sigma-B factor
Organism
nos
Nostoc sp. PCC 7107
Brite
KEGG Orthology (KO) [BR:
nos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nos03021
]
Nos7107_5038
Transcription machinery [BR:
nos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Nos7107_5038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
HTH_23
HTH_3
Sigma70_ECF
HTH_Crp_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AFY45553
UniProt:
K9QJI7
LinkDB
All DBs
Position
5885058..5885843
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AA seq
261 aa
AA seq
DB search
MAAIESSMRIDGIELLHLYHQNPSIKLRNQLVQLHTGLVRKMAHKFSHQCNEPYEDLEQI
GYFGLIRAIERFDPSQGYAFSSFAVPYIRGEMLHFLRDRSTLLKIPRRWQELYNEGQKIR
KELALDLGRPPKDSEIAKVLKVSVQEWQETKLAAQNRMPLSLDATAVHYVDCQITLGEAL
PCPRSAVMQQQEEERQQLQGAINMLEDKPRMAVEMVFLKELSRKDAAKNIGTSPMTVTRY
LQKGINDLINYLQPQIVASGS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaattgagtcttctatgcgaattgatgggatagagttattacacttataccac
cagaatccctcaattaaacttcgtaatcaacttgtacagttacatactggcttagtgcgg
aagatggctcataaatttagccatcaatgtaatgaaccttatgaagatttagaacaaatc
ggttattttggtttaattagggccattgagcgttttgatcccagtcaaggatatgcgttt
agttcctttgctgtgccatatattcgtggtgagatgctgcattttttgcgcgatcgcagt
acgctattaaaaattcctcgtcgttggcaagaactctacaacgaagggcaaaaaattcgc
aaagaattggctttggatttgggtcgtcctcccaaggattcagaaattgctaaggtactg
aaggtttctgtgcaagaatggcaagaaacaaagttagctgcccaaaatcgaatgcctttg
agtttggatgctacagcagttcactatgttgattgccaaattactttaggtgaagcacta
ccttgtcctcgttctgcggtgatgcagcaacaagaagaagaacgccaacaactccaaggg
gcaatcaatatgctagaagacaaaccccggatggcagtagaaatggtcttcttaaaagaa
ctttcacgcaaggatgcagctaaaaacattggtactagtccaatgaccgtaacgcggtat
ttgcaaaagggcattaatgatttgatcaattatttgcaaccacaaatagtggcatcaggg
tcttga
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