Nostoc sp. UHCC 0870: L6494_10810
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Entry
L6494_10810 CDS
T11470
Name
(GenBank) trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nosc Nostoc sp. UHCC 0870
Pathway
nosc03030
DNA replication
nosc03430
Mismatch repair
nosc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nosc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L6494_10810
03430 Mismatch repair
L6494_10810
03440 Homologous recombination
L6494_10810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nosc03032
]
L6494_10810
03400 DNA repair and recombination proteins [BR:
nosc03400
]
L6494_10810
Enzymes [BR:
nosc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L6494_10810
DNA replication proteins [BR:
nosc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L6494_10810
DNA repair and recombination proteins [BR:
nosc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L6494_10810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
Intein_splicing
DUF8124
Nitr_red_bet_C
Motif
Other DBs
NCBI-ProteinID:
UKP00149
LinkDB
All DBs
Position
2488657..2490006
Genome browser
AA seq
449 aa
AA seq
DB search
MIKIITRKYVGKENVYDIGVERDHNFVIKNGLIASNCFNKSHSTAYAYVTYQTAYLKANY
PLEYMAALLTANSGDTDKVQKYISTCMSMNIQIEPPDINRSGVDFTPVGGKILFGFSAVR
NVGQNAIAATLEARNEGGAFKSLADFCDRVDLRTVNRRTLESLIYCGAFDKIESNRQQLI
QDLELVYDWAQSRARDKASGQGNLFDLLGGLSSSNDNKTNNAFETAPKAKPVNDYPPQEK
LRLEKELLGFYVSDHPLKALRQVASLLTPINLSQLGEQREDTKLCVVVMLNGVKKVMTKK
GDAMAILQIEDLTSQTEAVVFPKTYERISFLLQVDVRLIIWGKLDRRDEQIQLIVEDAEP
VETVQMVMVELNPQQAANIEELHRLKTILQEQSGDKEKSKMPVIGIIQTEHSRKLVRLGW
QFCVQDARITVQALQNARFPAHLRPLTGG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaattattactcgtaagtatgtaggtaaagaaaatgtctacgatataggagtt
gagcgtgaccacaattttgtcattaaaaatggcttaatcgcttctaattgtttcaataaa
tcgcactcaacagcctatgcctatgttacttaccaaacagcatatctgaaagctaattac
ccactggaatatatggctgcactgctgacggctaacagtggtgataccgacaaggtgcag
aaatatatttccacctgtatgagtatgaatattcaaatagaaccaccagatattaatcgc
tctggggtggattttacgccagtgggggggaagattttgtttgggttttcggctgtgcgg
aacgttggacaaaatgcgatcgcggcgacgctagaagcacggaatgagggaggcgcgttt
aaatctctcgctgatttttgcgatcgcgtcgatcttcgcactgtcaaccgtcggacttta
gaatcgctaatttactgtggagcttttgacaaaatagaatcgaatcgtcagcaattaatt
caagatttagaactagtttacgattgggcgcaatcccgtgctagagataaagcatccggt
caaggaaatctatttgatttattaggtggcttgtcttctagcaatgataacaaaactaat
aatgcctttgaaactgctcctaaagctaaacctgtaaatgactatccaccccaggaaaaa
ttgcggctagaaaaggaattattaggtttttatgtctccgaccatccactaaaagcctta
aggcaagttgcatcgcttttgaccccaattaatctatctcaacttggtgaacaaagagaa
gacacaaaactctgtgtggttgtcatgcttaacggggtgaaaaaagtgatgaccaaaaaa
ggcgatgctatggcgattttgcaaatagaagatttaacatctcaaactgaagctgtagta
tttcccaaaacttatgaacgaatcagttttctgttacaagttgatgtcagattaattatt
tggggtaaactagaccgccgcgacgaacaaattcaattaatagttgaagatgcagaacct
gtagaaacagtacaaatggtaatggtggaactaaatccccaacaagcagccaatattgaa
gaactgcatcgcttgaaaacaattttacaagaacagtcaggtgataaagaaaagtcaaaa
atgcccgtgataggaattatacaaactgaacattctcgtaaattagtccgcttagggtgg
caattttgcgtacaagatgcccgtatcaccgttcaagctttacaaaatgccagattcccc
gcacaccttagaccgttgactggcggttaa
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