Nostoc sp. UHCC 0926: PQG02_14845
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Entry
PQG02_14845 CDS
T10708
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nosq Nostoc sp. UHCC 0926
Pathway
nosq03018
RNA degradation
Brite
Enzymes [BR:
nosq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PQG02_14845
Messenger RNA biogenesis [BR:
nosq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PQG02_14845
Ribosome biogenesis [BR:
nosq03009
]
Prokaryotic type
rRNA helicases
PQG02_14845
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WDD35514
LinkDB
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Position
3145288..3146817
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AA seq
509 aa
AA seq
DB search
MTLSFQELGISQERVEQLEKIGFTEPTNIQVQAIPQLLAGRDVVGQSQTGTGKTAAFSLP
ILERLDINQRAVQAIVLTPTRELAMQVHDAIAQFIGDEGLRVLAIYGGQSIDRQMLQLRR
GVHMVVGTPGRVIDLLDRGCLKLDQVKWFVLDEADEMLSMGFIDDVVKILSQAPVDRQTA
LFSATMPPSIRMLVNKFLRSPATVTVEQPKAAPNKINQVAYLIPRHWTKAKALQPILEME
DPETALIFVRTRRTAAELTSQLQGAGHSVDEYHGDLSQQARERLLSRFRNRQVRWVVATD
IAARGLDVDQLSHVINYDLPDSVETYVHRIGRTGRAGKEGTAISLVQPFERRKQQTFERH
NRQNWQVLTIPTRAQIEARHILKLQEQVREALTGERLASFLPIVSELIEEYDAQAIAAAA
LQIAYDQTRPAWLSSDVEIPQEESSAPKPRLGKRRESSSDRPRSAWKSDSSNGEERHASP
KPKLRTSGQDSSVSPSKKIGSPTARESAS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgactctttcatttcaagaattaggcatttcccaagaacgtgtcgaacaactagaaaaa
atcggttttaccgaaccaactaacattcaagtgcaagcaattccccaattgctagctggt
cgtgatgtggtaggtcaatctcaaactggaacaggcaaaacagcagcattttcactgcca
attttagaacggctagatattaatcaaagagccgtgcaagccatagttttaacaccaact
cgtgaattagcgatgcaagttcacgatgcgatcgctcagttcatcggcgatgaaggattg
cgggtgttagcaatctacggtggtcaatcaattgaccgccaaatgttacaactcagacgt
ggcgttcacatggtagtgggcactccaggacgggtgatcgatttgctcgatcgcggctgt
ttaaagctcgatcaagtgaagtggtttgtgttggatgaagctgatgaaatgttgagcatg
ggctttatcgacgatgtggtgaaaatcctctcgcaagcgcccgtagatcgccaaacagct
ttattctcggcaacaatgccaccatcgattcggatgttggtgaacaagttcttgcgatcg
cctgcaactgtcaccgttgagcagccaaaagccgctcctaacaagattaatcaggtagct
tatctgattccccgtcactggacaaaagccaaagctttacagccgattctggaaatggaa
gatccagaaacagctttaatctttgttcgcaccagacgcacagccgcagaactcaccagt
cagttacaaggcgctggtcacagtgtagatgaataccacggtgacttgtcccaacaagca
cgggaacggttattgagccgtttccgtaaccgtcaagtccgctgggtggtagcaactgat
attgcagcccgagggttagatgtcgatcaactctctcacgtaatcaactacgatttaccc
gatagcgtagaaacctacgtccatcgcattggtcgtactggtcgtgctggtaaagaagga
acagcaatttctttagttcagccatttgagcggcgcaaacagcaaacatttgaacgtcat
aaccgccaaaattggcaagtgctgacgattcccacacgggcacagattgaagcaagacac
atcctgaaattgcaagaacaggtgcgggaagctttgacaggtgagcgtttggcttcattc
ttgccgattgtcagcgaactgattgaagaatatgatgctcaagcgatcgccgcagcggca
ctgcaaatcgcttacgatcaaactcgtcccgcttggttgagttcagacgtggaaattccc
caagaggaatcttccgctcccaaacccagactgggcaagcgtcgtgaatcttccagcgat
cgcccccgttctgcatggaaatcagatagcagcaatggtgaagaaagacatgcttctccc
aagccaaaactgcggacaagtgggcaggattcttctgtatcccctagtaaaaagataggt
tcacctacagctagagaatcagcttcttag
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