Nostoc sp. UHCC 0926: PQG02_15530
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Entry
PQG02_15530 CDS
T10708
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nosq Nostoc sp. UHCC 0926
Brite
KEGG Orthology (KO) [BR:
nosq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nosq03021
]
PQG02_15530
Transcription machinery [BR:
nosq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PQG02_15530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
DUF6192
CM_1
EnY2
Motif
Other DBs
NCBI-ProteinID:
WDD35640
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All DBs
Position
3297602..3298585
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AA seq
327 aa
AA seq
DB search
MPTVNTQTENLNTKFTADMVRTYLREIGRVPLLTREQEIVYGKQVQQMMKFIDAKEALAK
KLHREPNMSEWADQVQESETEVQQTVAQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPMRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQTLGRSPTPAEIAKELELEPAQIREYLNMARQPVSLDVKVGDNQDTELQEML
EDGGPSPEYYTNQEFLRQDLNNLLAELTPQQREVLALRFGLEDGNEMSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVQEYVAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcaacacccaaacggaaaatcttaacaccaaattcacggctgatatggtg
cgaacctatctgcgggaaattgggcgtgtaccactgctaacccgtgaacaagaaattgtc
tatgggaagcaggtgcaacaaatgatgaagttcatcgacgccaaggaagctttggcgaag
aagctgcatcgcgaaccgaatatgtcagagtgggctgaccaggttcaagaatcggaaact
gaggtacaacaaacggtggcgcaaggtaagcgggcaaagcaaaaaatgatcgaagcgaat
ttgcgcttggtcgttgctattgccaagaagtaccaaaagcggaatatggagtttctggat
ttaattcaggaaggaacactaggattagagcggggtgtggagaaatttgacccaatgaga
ggttataagttctcgacttacgcttactggtggattcgccaagcaattacccgcgcgatc
gcccaacaaggtcgcaccatccggttaccgatccacattaccgagaaactgaataaaatc
aagaaagtacagcgtgagttggctcaaaccttggggcgatcgcccactccagccgaaatt
gccaaagaactggaactagaacctgctcagatccgcgagtatctgaacatggcgcgtcaa
ccagtgtctttggatgttaaagttggcgataaccaggatactgagttgcaagaaatgctc
gaagatggcggcccatcgccagagtattacaccaaccaggaattcttacgccaagacttg
aacaacctgctagcagaactaaccccgcaacagcgagaagttttagccctacgctttggt
ttagaagatggtaatgaaatgtcattggcgaaagtgggtgagagattgaatctcagccgt
gaacgtgtccgccagttagagcatcaggctttggctcatctgcgtcgccgtcgtgccaat
gtccaagaatacgttgctagctag
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