Nostoc sp. UHCC 0926: PQG02_21895
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Entry
PQG02_21895 CDS
T10708
Name
(GenBank) DHHA1 domain-containing protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nosq Nostoc sp. UHCC 0926
Pathway
nosq03410
Base excision repair
nosq03430
Mismatch repair
nosq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nosq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQG02_21895
03430 Mismatch repair
PQG02_21895
03440 Homologous recombination
PQG02_21895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nosq03400
]
PQG02_21895
DNA repair and recombination proteins [BR:
nosq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PQG02_21895
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PQG02_21895
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PQG02_21895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WDD31353
LinkDB
All DBs
Position
complement(4698698..4700815)
Genome browser
AA seq
705 aa
AA seq
DB search
MLDRAVSELSKPNRRLPDQRWQIYPQKPEFVQNLAVLTNISPIISQLLINRGMETPEQVQ
AFLEPESLVLPSPLEEFPDLAISLELLENAIASQTKIAICGDYDADGMTSTALLLRSLRT
LGAQVDYAIPSRMHEGYGINKRIVEEFHSEGVGLILTVDNGISAFEPVARARELGLAVII
TDHHDIPQKLPPANAILNPKLIAESSPYRGVAGVGVAYILAVSLAQQLGETKGLIQPMLA
LFTLGTIADLAPLTGVNRRWVKRGLQHLPKSNLAGVRALIQVGGVQARGDERAGGVGEQG
SRGENPKSKIQNPKSLKPEDIGFRLGPRINAIGRIGNPQTVIELLTTDDMGVALERAMQC
EQINASRQLMCEQIEQEAIAYVEAEFVASLQQDRVLVVVQPNWHHGVIGIVASRLVERYG
VPVFIGTYEDEQHIRGSARSIPEFHVFEALEYCHDLLGKFGGHKAAGGFSLPAENLQVLR
SRLIEFANQCLEPQHLKPLLKIDAEVNLNHLNQQLYQQLNALHPCGMDNPDPVFWTPNVQ
VVEQKIVGKGHIKLTIAQTIDNQEYKIKAIAWRWGDYFRLPSRVDVAYKLRENYFNGNTT
IELELIGVRLPIQLQQFFASPPIQSSTTFEYNQRHYTCGFYKNGIEAELRIKNSEGKVLA
MQPGHTIGLLGTNRQNAKEVDISQPQYDSIIQVALQALSVLSAEL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgctagaccgagctgtatctgaactatcaaaacctaacaggcgcttacctgatcagcgc
tggcaaatttatccacaaaaaccagaatttgtccaaaatctggcggttttgacaaatatt
tcccctattatcagtcaactgctgattaatcggggtatggaaacaccagaacaggtacaa
gcatttttagagccagagtctttagtcttaccttcgccattggaggaattcccggatttg
gcgattagtttggagttgttggaaaatgcgatcgcttctcaaacaaaaattgctatctgt
ggtgactacgatgctgatgggatgaccagcactgctctacttttgcgtagtctccgcact
ttaggcgcacaagtagattatgctatccccagccggatgcacgaaggttacggtattaat
aaacgcatagttgaagaattccacagcgaaggtgtggggctaattctgactgtagataat
ggcatatctgcgtttgaaccagttgctagagctagagaacttggtcttgcagtgattatc
accgatcaccacgatatcccccaaaaattaccgccagctaacgctatcctcaaccccaaa
ctaatagccgaatcctcaccttatcggggtgttgctggtgttggtgttgcctacattttg
gcagtgtctctagcacaacaactaggggagactaaaggcttgatccagccgatgctagca
ctatttacactgggaacgatcgcagatttagctcccttaactggtgtaaatcgccgctgg
gtaaaacgtggtttacagcatttacccaaatccaacttggctggggtgagggcgttaatt
caggtaggcggcgtgcaggcgaggggagatgagagagcagggggagtaggggagcagggg
agcaggggagaaaatccaaaatccaaaatccaaaatccaaaatcgctcaagcctgaagat
atcgggtttcgcctggggccacgaattaatgctattggtcggattggtaatccccagact
gtcattgaattgctaactacggatgatatgggggtggcgctagaaagagcaatgcagtgc
gaacaaatcaacgcctctcgccagctaatgtgtgagcaaattgaacaagaagcgatcgct
tatgtagaagcagaatttgttgcgtctctacaacaagaccgtgtattagttgttgttcaa
cccaattggcatcacggcgttattggtatcgtcgcctcccgcttggtggaacgctatggc
gttcccgtgtttatcggtacttatgaggatgagcaacatatacgcggttcagcacgctca
attccagagtttcatgtatttgaagctttggaatattgtcacgatttactaggcaaattt
ggcggacacaaagcagccgggggattctctctaccagcagagaatttacaggtgttgcga
tcgcgtttgattgaatttgctaaccagtgtcttgaaccccaacatctcaagcctctgctc
aaaattgatgctgaagtcaatctcaatcatctcaatcagcagctttaccaacagcttaat
gctctacacccctgcggtatggacaaccccgatccagttttctggacacctaatgtccaa
gtggttgagcaaaaaattgttggtaagggtcacatcaaactgacaattgcccaaactatt
gataatcaggagtacaaaattaaagcgatcgcttggcgttggggcgactacttccgctta
ccatcgcgagtggatgtcgcttacaaactgcgagaaaattactttaacggtaacaccacc
atcgagctagagttaataggagtcagactgccaattcagcttcaacaattttttgcttcg
ccacctatccagtcaagtacaacttttgaatacaaccagcgacattatacttgtggtttc
tataaaaacggtattgaagcagaattaagaattaaaaattctgaaggcaaagttttagcc
atgcagccaggacatacaatcggtttgctgggcactaatcgtcaaaacgccaaagaagtt
gatatttctcaaccacagtatgacagtattattcaagttgcccttcaggcgttatcagtg
ctgagtgctgagttatga
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