Nostoc sp. UHCC 0926: PQG02_28080
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Entry
PQG02_28080 CDS
T10708
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
nosq Nostoc sp. UHCC 0926
Brite
KEGG Orthology (KO) [BR:
nosq00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PQG02_28080 (tnpB)
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Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
RuvC_1
zf-piccolo
Motif
Other DBs
NCBI-ProteinID:
WDD32469
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Position
complement(6048900..6050135)
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AA seq
411 aa
AA seq
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MSSIQKAFKVTLIPTHNQEVFINKTIGCARYVYNCFLALKKELYTSEGKTLNYNGCSQQL
TILKKEIKWLKEVDKFALQNSLKNLETAYKNFFADLKKVKGKKGVGFPKFKKKYGCKQSY
KTNLTNGNIQIIENRLKLPKLGWVKFHKSQDITGKLVNVTVTRTSAGKYIASILCETEIE
KYPQVTENIGLDLGIKTYLVTSKGEVVDNPKYYRTQTRKLRSCHKKLSRSVKGSSNRVKA
KNKLARTYERITNLRDDFLHKLSTRLIKENSIICIEDLRVANMVKNHKLALSISDASWSK
FVIMLEYKALWHDRIVQKVGTFYPSSQTCNCCGFINPLVKDLKLREWSCPSCNSYNLRDK
NAALNILSEGLRLLTAVGTPEVIKNACGELVSPEVIQAEIVEVGITPLIVV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatccatccaaaaagcatttaaagttactctcatccccacacacaaccaagaagtc
tttatcaataagacaattggttgtgccagatatgtgtacaactgctttttggcgctgaag
aaagagttatatacaagtgaggggaaaaccttaaactacaacggttgtagtcaacagcta
actatactcaagaaagaaattaaatggttaaaggaagtagataagtttgccttacagaat
tcactcaagaatttagagacagcatataaaaacttttttgctgacttaaaaaaggtcaaa
ggcaagaaaggtgttggttttcctaaattcaaaaagaagtatggatgcaagcagtcttat
aaaactaatctgaccaacggcaacattcaaatcatagagaatcgtttaaagcttcccaag
cttggatgggtaaaattccacaagtcacaagatattactggaaagcttgtaaacgttact
gtaactcgcacttctgctggtaaatacattgctagtatcctgtgcgaaacagagatagag
aaataccctcaagtcacagagaatattggattggacttgggaattaaaacctatcttgtt
actagcaagggtgaggttgtagataaccccaagtattacaggactcaaactcgtaaatta
cgctcatgccacaaaaaactatcccgcagtgtaaaaggtagtagtaatcgagtcaaagcg
aaaaacaagctggctcgtacttacgaacggattacgaatttgagagatgattttctgcac
aagctgtcaactcgtttaatcaaagaaaacagtatcatctgtatcgaggatttgcgagtt
gccaatatggttaaaaaccataaattagccctgagtatttcagatgctagttggtcgaaa
ttcgttataatgctcgaatataaagctttgtggcatgacagaattgtgcagaaagttggg
acgttttatccctcttctcaaacttgcaactgttgtggttttatcaatccactagttaag
gatttaaagttgcgtgaatggtcttgtcctagttgtaatagttataatttgagggataaa
aacgcagcgcttaatatattaagtgagggtttaagattactaaccgccgtcggtacgccg
gaggttataaaaaacgcctgtggagaacttgtaagtcctgaagtaattcaggcagagatc
gttgaagtaggaatcacgccacttatagtggtgtga
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