Nostoc sp. UHCC 0926: PQG02_30575
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Entry
PQG02_30575 CDS
T10708
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nosq Nostoc sp. UHCC 0926
Pathway
nosq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nosq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQG02_30575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nosq03019
]
PQG02_30575
03400 DNA repair and recombination proteins [BR:
nosq03400
]
PQG02_30575
Enzymes [BR:
nosq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQG02_30575
Messenger RNA biogenesis [BR:
nosq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PQG02_30575
DNA repair and recombination proteins [BR:
nosq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PQG02_30575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDD32893
LinkDB
All DBs
Position
complement(6547659..6549101)
Genome browser
AA seq
480 aa
AA seq
DB search
MNQPTTKSWQEVRAAFKKIWGYEDFRPPQGEIVSSLLSQKDALIIMPTGGGKSICFQLPA
LLQTGLTLVVSPLVALMENQVQELRESHQKAALLHSELSSSQRRATLQALERQQLRLLYL
SPETLLSAPVWERLCQPQLQINGLILDEAHCLVQWGDTFRPAYRRLGAVRPALLKSKPPG
TKISIAAFTATADPSAQKIIQTVLQLQQPEIFRLNPYRPNLYPSIRIAWTPRGRKQQLLK
FIQNRPQQSGLVYVRTRRDSEDLAQWLADMGYATASYHAGLGATERRAVEASWLGGKIPF
VVCTCAFGMGINKSDVRWVAHFHAPHLLSEYVQEIGRAGRDGKPAQALTLVSEPTGWLDR
EDKQRQQFFEEQMRSQQQIAQQLVKKLPKQGEVNAVTRQFPEGAIALALLHSNGQLNWLD
PFHYTIGQKAGNQPPTQLHAAKQMHQYLTTKQCRWQFLLNAFGFDKEAANLRCGHCDNCR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcctacaacaaaatcttggcaagaagttcgcgctgctttcaaaaaaatctgg
ggttatgaagatttccgtccaccacagggagaaattgtcagcagtttactatcacaaaaa
gatgcactgattattatgcccacaggtggcgggaagtcgatttgttttcaacttcctgca
ctgctacaaacaggattaactttggtagtttcgcccttggtggcgctaatggaaaatcaa
gtacaggaactacgagaaagccaccaaaaagcagcacttttgcatagtgaattatcttca
tctcaacgccgtgcaactctgcaagctttggaacgtcaacagctaagattactttattta
tcgcccgaaactttgctcagtgcgccagtttgggaaagattatgtcagccgcaattgcaa
attaatggtttgattttagatgaagctcattgtttagtgcagtggggtgatacttttcgc
ccagcttaccgcagattaggggcggtgcgtccggcattgctcaaatcaaaaccaccagga
acaaaaattagtatcgccgcttttactgctactgctgacccctcagcccaaaagattatt
caaacagttttacaattacagcaaccagagatttttcgcttgaatccctaccgtcctaac
ttgtatcccagcattcgcattgcttggacaccacgaggtaggaaacaacaattattaaag
tttattcaaaatagaccgcaacaatcgggattagtttatgttcgcactcggagagatagc
gaagatttagcccaatggttagcagacatgggttatgccacagctagttatcatgcggga
ttgggtgcaacagaacgccgtgcagtagaagcaagttggttaggtggcaaaatccccttt
gttgtgtgtacctgtgcgtttggtatggggataaataaatctgatgttcgttgggtagcc
cattttcacgcaccacatctgctgtctgaatatgtgcaagaaattggccgggctggaagg
gatgggaaaccggcccaagcgttgacattggtgagtgaacctacggggtggttagatcga
gaggataagcaaagacagcagttttttgaagaacaaatgcgatcgcaacagcaaatagcg
cagcaacttgtgaaaaaattaccaaaacagggagaagtgaatgcagtaacccgacaattt
cccgaaggtgcgatcgccttagctttactccatagcaatggtcagctaaactggcttgat
cctttccattacaccattgggcaaaaagcgggaaatcagccaccaacgcaattacacgct
gctaaacaaatgcatcaatatctgactaccaagcagtgtcgttggcagtttttgttaaat
gcctttggttttgacaaagaagcagctaacttgcgttgcggacattgcgataattgtcgc
taa
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