Nostoc sp. ATCC 53789: GJB62_01225
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Entry
GJB62_01225 CDS
T10687
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost03420
Nucleotide excision repair
nost03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GJB62_01225 (pcrA)
03430 Mismatch repair
GJB62_01225 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_01225 (pcrA)
Enzymes [BR:
nost01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJB62_01225 (pcrA)
DNA repair and recombination proteins [BR:
nost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJB62_01225 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GJB62_01225 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_30
ResIII
GA
Rv2949c-like
AAA_22
Terminase_6N
SinI
Motif
Other DBs
NCBI-ProteinID:
QHG14748
LinkDB
All DBs
Position
complement(312060..314381)
Genome browser
AA seq
773 aa
AA seq
DB search
MTTTIDFLSHLNPSQRQAVEHYCGPLLVVAGAGSGKTRALTYRIANLILKHKVDPEHILA
VTFTNKAAREMKERIQRLFAEQLAMKQHGQRLDLLTEYQQTQLRSQVYKSTIKDLWCGTF
HSLFSRILRFDIEKYVDEKGRKWNRNFSIFDESDVMTLIKEIVNKELNLDDKKFDARSVR
YAISNAKNQGLSPQEFEQDQPNYRGRVIAQVYNLYQDKLAQNNALDFDDLILVPTRLFQQ
NEQVLGYWHRKFRHILVDEYQDTNRTQYQLINLLVTNGETKKSEWQWENRSVFVVGDADQ
SIYSFRMADFTILLGFQEDFGDGLVDDDTRTMVKLEENYRSCENILQAANELIENNTQRI
DKVLKATRGTGEQITCHKADEELAEAAFVINQISTLEQQNPELNWGSFAILYRTNAQSRP
FEELLVKYQIPYTVVGGMRFYDRKEIKDVVAYLRAINNPADTVSLLRVINTPRRGIGKTT
IDALINASQQLGTTLWEILSDETSVNTLAGRATKAVNNFAAMISRWQGQVATLPVTEVLQ
GILEDSGYVQDLMNQGTDEATDRVQNVQELYNAALQFQEENEEISLRDFLSSAALSSDLD
NLKEGQTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLSDPASLEEERRLCYVGITR
AQERLYLSHARERRLYGSREPAMRSQFLDELPEELLSTKRASRQSYTKSASTSSEKQDAT
QNWQVGDRVLHKTFGLGEITHVFGTGNKMSVAIKFASLGQKIVDPRVAQLQKI
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaccatcgactttctcagtcaccttaaccctagccaacgtcaagctgtcgaa
cactactgcggcccgttgctagttgttgctggcgcaggttccggtaaaacacgagcgctg
acttatcgcattgcaaatctgattctgaaacacaaagttgatccagaacatatcctggcg
gttacttttaccaacaaagcggcgcgggaaatgaaagaacggattcaacggctgtttgcg
gaacaactggctatgaaacaacatggtcagcgattggatttgttgacagaataccaacaa
acgcaattgcgatcgcaagtttacaaaagcactatcaaagacttatggtgtggcactttc
cacagtctattttctcggattctccgttttgatattgaaaaatacgtagacgaaaaagga
cgcaagtggaatcgtaatttctctatctttgatgaatcagatgtgatgactctgatcaaa
gaaatcgttaataaagagctaaatttagacgataagaagtttgatgcccgctctgtccgc
tacgctattagtaacgctaaaaaccaaggtttatcaccccaagaatttgagcaagatcaa
ccaaattatcgcggacgggtaattgcccaagtttacaatttatatcaagataagttagca
caaaacaacgctcttgactttgacgatcttattcttgtacctactagattatttcaacaa
aacgagcaggtattgggttactggcatcgcaagtttcgccatatccttgtagatgaatat
caggatactaaccgcactcagtatcaacttattaatttattagttactaatggcgaaacc
aaaaagagcgaatggcaatgggaaaatcgctcagtttttgttgtcggcgatgcagaccaa
tcaatctacagctttcggatggcagatttcaccatcttgctaggatttcaggaagacttt
ggcgatggtttggtagatgatgacacccgaacgatggttaagctggaagaaaactatcgt
tcttgtgaaaacattctgcaagcagctaatgaactgattgaaaataacacccaacggatt
gataaagttctgaaagcgacgcgggggacgggtgaacagattacttgtcacaaagctgat
gaagaacttgcagaagcggcatttgtaattaatcaaattagcactttagaacagcaaaat
ccagagttaaactggggtagttttgccatactttatcggacgaatgcccaatctcgtccc
tttgaagaattgttggtgaaatatcaaattccttacacagttgtgggaggaatgaggttt
tacgatcgcaaagaaattaaagatgtcgtcgcttatttaagagcgataaataacccagct
gatacagtcagtttattgcgagtgattaatactccccggcggggaatcggcaaaaccact
attgacgctttgataaacgcatctcagcaattagggacgactttgtgggaaatactcagc
gatgaaacatcagttaatacattagctggacgggcaacaaaagctgtaaataactttgcc
gcaatgatcagccgttggcaaggacaagtcgccacgcttccggtaactgaggttttgcaa
ggaatattagaagattctggttacgttcaagacttgatgaatcaaggcacagatgaagcc
acagatcgggtacaaaacgttcaagaactttataacgctgcactgcaatttcaagaagaa
aacgaagaaatttccctgcgagattttctaagtagtgccgccctcagttccgatttggat
aacttaaaagaaggtcagacagccgtttctttgatgactttgcacgcttccaaaggtttg
gaatttcccgtagtatttttggtgggattagaacaggggctatttcccggctaccgttcc
ctaagtgaccccgcatctttggaagaggaacgccgcttgtgttatgtaggaattactcgc
gctcaagaaaggttgtatttatcacacgcgcgggaacgccgtttgtatggttctcgtgaa
cctgcgatgcgatcgcaattcctcgacgaattaccagaagaattattatctaccaaacgc
gcaagtcgtcaaagctataccaaaagtgcctctacttctagtgaaaaacaagacgcaacc
cagaattggcaagttggagatagagtattacacaaaacctttggtcttggtgaaatcacc
catgtcttcggaacaggtaataaaatgtctgtagcaattaaatttgccagcttaggacaa
aaaattgttgacccaagagtagcacaattgcaaaaaatttga
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