Nostoc sp. ATCC 53789: GJB62_02460
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Entry
GJB62_02460 CDS
T10687
Name
(GenBank) GAF domain-containing protein
KO
K11525
methyl-accepting chemotaxis protein PixJ
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GJB62_02460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nost02035
]
GJB62_02460
Bacterial motility proteins [BR:
nost02035
]
Pilus system
Positive phototactic motility proteins
GJB62_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
GAF_2
MCPsignal
GAF_3
HAMP
Motif
Other DBs
NCBI-ProteinID:
QHG14957
LinkDB
All DBs
Position
complement(670267..675504)
Genome browser
AA seq
1745 aa
AA seq
DB search
MVMHTPSQPRSNSSNGFKETDNGHTVDVPAKQQITSALEELRTELDQADWVETGPLRERI
RKLKELLSVLPYQDGGDGLEVEQVQAIASKIRQFSDLDTLLATVVMEVQSALQADRVVLY
EFTNPTQGIVVAEGMRDGFTPMLKEKLPAVIFGLGSAKLYQQEKLVAIADTNTASLSPYQ
KQLVERFQVRACVSLPILAKDGVWGLLVVQQCAAARQWQNAEIQLLKLIEQELEAQLQVA
AIQAALQQEVEKDQILVGVANKILQSKDLDTIFRVATQEVRQSLKCDRVAIYRFQPDWSG
EFVAESAGSEWVSLLEEQRNNPAIVNNVNYCSVRNLADEGGLAGTTGRSHSADSYIQHTQ
GKTFHRGQIYRVTNDIYSVGFSDCYIKILEAYQAKAYIIVAIFQGEKLWGLLAAYQNSQP
RQWKDSEVRLMVQVATLSSITIQQVQYQQQLYHRSEESAKLVERERTVFGIIEKIGQATD
LRTLFRITTQELRRFLKCDRVVVYQFHPDWSGEVIAESVAAGWSSLLEMQEQDGILKTGL
ISSERCNIKDYGSPVKADADTHLKETQGGMYAKGTRFRKVNDISAAGFSPCYLEALEKFQ
AKAYIIVPIFRAGNLWGLLAAYQNSDVRKWTEEETGALLQIGEPLSIALQQAEYIEQLRL
KNLEMTQVAEVENAIARMADRMRNSQQLETIYRTTLAELRQLFKCDRLAIYRFNSDWSGE
FIAESVGSDWVPLVGPDIKTVWEDEHLQQTQGGRYRNNETLAVNDIYTVGYAQCHIDLLE
QFQVKAYTIAPIFAGNKLWGLLGAYQNSGPRQWNSEEVRLLTKLGIQLGLSVQQVEYIEQ
LKMKNAELARAAEEEQVLTGMVEKIRQAQDMDTIFLNVLPSLRKQLQCDRLAVFRFHPDW
SVEFVAESVKDKWLSLADSDIKTIWMDEHLQETQGGRYRNHETFVVNDIYTVGHVQCYLE
ILEKIQAKAYAIAPIFIGNKLWGFIGAYQNTGPREWKSKDVQLLRKVAVQMGIGLQQVKY
IEQLKNKNAELARTAEGERALTRLSEKIRQVQELDTIFRNALPELRSHLECDRLAVYRFN
PDWGGEFVAESVSREWVALVGPDIRTIWEDEHLQQTQGGRYRNNETFVINDVYTAGHAQC
HLKILEQFQIRAYIITPIIAGNKLWGLLGAYQNSGPRQWQENEVNLVAKIGTQFGVAVQQ
SQYLQQTLSKNEELIKLAEREVANARFSYRLPSRLTEMAQSHGNVLEFIQFATHELRQLL
KVDRVGVYRFEPDWSGEFVVESVTGDWPKLVGTSLAKVRDTYLQYNQGGRYVRKESLQVD
NIYTVGHDECHIQLLEMWGTKAYMISPIFQENRLWGLMGVYQNSAPRQWEQSEEDVLNQA
SVQIGIALNLADYLTQVRTQEQQLAEAAERERTAREKLQQGAIRVLMALEPSFRGDLTVR
APLSEDEIGTIADGYNTTIQSLRDLVRQVQIAAGRVSETSSDNTISVVKLSDQAQQQAER
LEHALEQLQIMVTSTQIVAADAQKVGQAVQRANNTVQAGDSLMERTVDGILEIRETVSET
AKKIKRLGEASQKISKVVSLIENFATQTNLLALNAAIEATRAGEYGKGFAVVADEVRSLA
YQSASATTEIERLVQEIQAGTNEVTEAMEIGISQVVQGSNLIDETRHSLSAIVVATNEIG
GLVQGITLAVSHQSQQSQMLTEAMMDVSAIARKTSESAIHISESFEELRMTSQQLETSVS
QFKVD
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgcatacacccagccaacctcgctcaaattccagcaacggttttaaggaaacc
gataacgggcataccgttgatgtaccagcaaaacagcaaatcacctccgctctagaagaa
ttgcgaactgaactggatcaagctgattgggtggaaacagggccattgcgagagagaatc
cgcaagttaaaagagctgctaagtgtgttgccatatcaagacggaggagatggattagag
gtagagcaagtacaggcgatcgctagcaaaatccgccaattttccgatctagatactttg
ctcgccactgttgtcatggaggtacaaagcgccctgcaagccgatcgcgtggtgctgtat
gagtttacgaatccaacgcaggggatagttgttgcggaggggatgagggatggctttacc
ccaatgctgaaggaaaaactgcccgccgtcatttttgggttaggttctgccaagctttat
caacaagaaaaattagtcgcgatcgcagatactaatactgcaagcttgtccccttaccaa
aagcagcttgtggagcggtttcaggtaagagcttgtgtgagtttgccgattttagcaaaa
gatggggtttggggtttgttggtagtgcagcaatgcgctgctgctcgccagtggcagaat
gctgaaattcagttactaaaattaatcgagcaggaattagaagcgcaactgcaagttgcc
gcgatccaggctgcgttgcaacaagaagtggaaaaagaccaaatcctggtcggtgtagcg
aataaaattctccagtccaaagatttggataccatctttcgcgttgccacccaagaagtg
cgacagtcgttaaaatgcgatcgcgtggcaatttatcgtttccagccagattggagtggg
gaatttgtagctgaatctgctggatctgagtgggtttctctattagaagaacagcgaaac
aacccagcaattgtcaataacgttaactattgcagtgttaggaaccttgcagacgaaggg
ggattggctgggacaacagggcgatcgcacagtgcagatagctacattcagcatacccaa
ggcaaaactttccatcgcggacagatttatcgagtcactaatgatatatatagtgttggt
ttttctgactgctatatcaaaattttagaagcttatcaagccaaagcatacattattgtt
gccatcttccagggagaaaagttgtggggcttgctcgctgcctatcaaaattctcagcct
cgtcagtggaaagatagtgaagttcgcctaatggtgcaggttgcaactctgtctagtatt
actattcaacaggtgcaatatcagcaacaactttatcaccgctctgaggagtcagccaaa
cttgttgaacgagaacgtactgttttcggcatcattgaaaagattgggcaagcaacggat
cttcgcacccttttccggattacaacccaagagttgcggcgatttttaaaatgcgatcgc
gttgtcgtttatcaatttcatccagactggagtggagaagttattgctgaatctgtggct
gctggttggtcgtcactgttggagatgcaggaacaagacggcattttaaaaacaggtctg
atatcttcagaacgttgcaatattaaggattatggctcccctgttaaagctgatgccgat
acccatctcaaggaaacgcagggtggaatgtacgccaaaggaacgcgcttccgtaaagtc
aacgatatttctgctgctggtttttcaccttgctatttagaagcattagagaagttccaa
gccaaagcatacatcattgttcccatcttccgcgctggtaatctttggggtttgttagca
gcctatcagaattctgacgttcggaaatggactgaggaagagactggtgctttgttgcag
atcggcgaaccgttgagcattgccctccagcaagctgaatatatcgaacagctacggtta
aaaaatctagaaatgacccaagtagctgaagtagaaaacgcgatcgcccgaatggcggat
agaatgcgtaattcccaacagctagaaacgatttaccgcactaccttggcagaattgcgg
cagttgttcaaatgcgatcgcctcgcaatatatcgcttcaactctgactggagtggtgaa
tttattgctgaatctgtaggaagtgactgggtgcctctggttggccccgatatcaagacc
gtatgggaagacgaacatctacagcaaacccagggcggacgctatcgcaacaatgaaacc
ttagccgtcaatgacatctatactgttggttatgctcagtgccacattgacctgttagag
cagttccaagttaaagcctacaccatcgctcccatttttgctggcaacaaactttggggt
ttgttaggggcttaccaaaatagcggcccgcgccagtggaattccgaagaggtgcgattg
ctgaccaaattgggcattcagttggggttaagcgtgcagcaagttgagtacatcgaacag
ctgaagatgaagaatgcagagttggcgcgggcagcagaagaggaacaagtgctgacaggg
atggtggaaaaaatccgtcaagctcaggatatggacacaattttcctgaatgtgctgcca
agtctacgcaaacaactacagtgcgatcgcctagcagtatttcgctttcatcccgactgg
agtgtggagtttgttgccgaatccgtaaaagataaatggttgtctttagctgattccgac
atcaaaacgatttggatggacgaacatttacaagaaactcagggcggacgctatcgcaat
catgaaacctttgttgtcaatgatatctacactgtcggtcacgttcagtgctacctagag
atattagaaaaaatccaggctaaggcttacgcgatcgctccgatctttattggaaacaaa
ctctggggctttatcggagcataccaaaatactggccctcgcgagtggaaatccaaggat
gtgcaactgttgcgaaaagtagctgtgcaaatgggtataggcttgcaacaggttaagtat
atcgaacagctcaagaataagaatgcagagttagccagaaccgcagaaggggaacgagca
ttaacacggctgtcagaaaaaattcgccaagttcaagagctagatacgattttccgcaat
gccctaccagaattgcgatcgcatttggaatgcgatcgtctagccgtgtatcgcttcaat
ccagattggggtggggagtttgttgccgaatccgtaagtcgtgaatgggtggctttggtt
ggccccgatattaggactatatgggaagacgaacacctacaacaaacccaaggtggacgc
tatcgcaacaacgagacgtttgtgattaatgacgtttacactgctggccatgcccagtgc
cacttgaaaattctcgagcaatttcagattagagcctatatcatcaccccgattattgcc
ggaaacaagctctggggtttgttaggagcttaccaaaatagcggcccgcggcaatggcaa
gagaatgaagtcaacttggtagcgaaaatcggcacgcagtttggggttgccgtccaacaa
tcccaatacttacaacaaaccttaagcaagaatgaggaactgatcaaactggcagaacgg
gaagtagcaaacgcccgattttcctatcgcctgccaagtcggttaacagagatggcccaa
agtcatggtaatgttctggaatttatccagtttgccacccacgaacttcgtcaactgctg
aaagtagatcgagttggagtttaccgttttgagcctgattggtctggagaatttgtagtt
gagtctgtgactggggattggcctaagctcgtgggaactagccttgccaaagttagagat
acctatctccagtacaaccaaggagggcgttatgtccgcaaagaaagtttgcaggttgac
aatatatatactgtcggtcatgacgaatgtcacatccaattgttagaaatgtggggaact
aaagcctacatgatttctccgatttttcaagaaaatcggctatgggggctgatgggagtt
tatcaaaatagcgcaccgcgccagtgggagcaatccgaggaggatgttctcaaccaagcc
agcgtccagattggtattgccctcaatcttgcagactacctaacacaggtgcgtactcaa
gagcagcaactagcagaagcagcagagcgcgaacgcaccgcacgagaaaaactgcaacaa
ggagcaatacgcgttctcatggctttggaaccatccttcagaggcgatctgaccgttcga
gcgcccctatctgaagatgaaattgggacgatcgccgatggttacaatactacgatccaa
agtttgcgagatttagtgcgacaagtgcagattgctgctggcagggtgagtgaaacttct
agcgataacactatctcagtagtgaaactatctgaccaagctcaacagcaggcagaacgg
cttgaacacgctctggaacaattacaaattatggtaacttccacccagatagtcgctgct
gatgctcaaaaagtcggacaggcggtgcaaagagctaataataccgtccaagctggtgat
tccctgatggaaagaaccgtagatggcattttggaaattcgggaaactgtgtcggaaaca
gccaagaagattaaacgtctcggtgaagcttctcagaaaatctcgaaagtagtgagtctg
attgaaaactttgccactcaaactaatttgctagcgctcaatgcggcgatcgaggctacc
cgtgctggagagtatggcaaaggctttgcggtggttgcagatgaagttcgttctctggct
tatcagtcggcaagtgccaccacagaaattgagcgactcgtgcaagaaattcaagctggc
accaacgaagttaccgaagcaatggaaatagggattagccaagttgtccaaggctcgaac
ttgatcgatgagactcgtcattcgctcagtgcgatcgtggtagctaccaacgaaattggt
ggactggtgcaaggaattaccctagcagtttcccatcaaagtcagcaatctcagatgttg
acagaggcaatgatggatgtttcggcgatcgcccgcaagacttcagaaagtgccatccac
atttccgagtcttttgaggaactacggatgacttcacaacaactggaaaccagcgttagc
cagttcaaagttgactaa
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