Nostoc sp. ATCC 53789: GJB62_03875
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Entry
GJB62_03875 CDS
T10687
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GJB62_03875 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_03875 (priA)
Enzymes [BR:
nost01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJB62_03875 (priA)
DNA repair and recombination proteins [BR:
nost03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJB62_03875 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
LexA_DNA_bind
Zn_ribbon_6
zf-CHY
Nudix_hydro
Motif
Other DBs
NCBI-ProteinID:
QHG15199
LinkDB
All DBs
Position
964299..966947
Genome browser
AA seq
882 aa
AA seq
DB search
MYINDIKLSPLVVAEPSESYQSGTTLNRWVEVLVDCPGSTGLFTYRLPAQLEIKPGDILS
VPFGAQQLGAIAIRLLAQPNIDLAPEKIREVEDIVSVGFFPSAYWELLNRVAAYYYTPLI
QVIRVALPPGLLGRSQRRIRLVRGGGAGGRGQGAGGSSYLLASSDPLAFLTPTARQVWEL
LQGQPAGDYSFAYLQQKVKSAYRGIRELLRFGLVESYLEPPRLTRPKLQKAVILTGTIDS
DLTTRQREILEVLRRHNGELWQNELLLICNASSSILKTLTQKGYIVIEEREVLRTEQGPV
LAGDGAKSLTAAQASALQTIQTLDGFAEVLLHGVTGSGKTEVYLQAIAPLIKQGKSALVL
VPEIGLTPQLTDRFRARFGNKVSVYHSALSDGERYDTWRQMLTGEPQVVIGTRSAVFAPL
PNLGLIILDEEHDSSFKQDSPIPTYHARTVAKWRAELENCPLLLGSATPSLETWVSVGGK
HGSRGAGEQGSRGAGGEFVTPHSSLSTQHGLNAPLPLTSLSTHYLSLPERINSRPLPPVE
IVDMRQELQQGNRSIFSRSLQEALQQLQEKKQQGILFIHRRGHSTFVSCRSCGYVLECPH
CDVSLAYHHTEEKAPELLRCHYCNYARSHPKYCPDCSSPYLKFFGSGTQRVTQELARQFP
ELRLIRFDSDTTRNKGSHRTLLTQFANGEADLLVGTQMLTKGLDLPQVTLVGVVAADGLL
NLSDYRASERAFQTLTQVAGRAGRGDDPGRVIVQTYTTEHQVIAAVRSHDYHSFSQAELE
QRQALNYPPYGRLILLRLSSLDPIQVQNTAQIIATALSTEEEFEILGPAPASILRVANRY
RWQILIKFAPDALPQLPDWEEVRSLCPSSVSLTIDVDPLNIM
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaatgacataaaattatctcctttagtagtggctgaacctagcgaatcgtac
caatcaggtacaactcttaatagatgggttgaagtactggtagactgtccaggaagtaca
ggattatttacttatcgattgccagcccagttagaaataaaaccaggggatattttgagc
gtgccatttggggcacaacaattaggagcgatcgcaattcggttactggcacaaccaaat
atcgatttagcaccagaaaaaatccgggaagtagaagatatagtcagcgttggatttttc
ccaagtgcttattgggaattactcaatcgagttgccgcatattactatacgcccctgatt
caagtaatccgggttgctctaccaccagggttgctggggcgatcgcagcgccgtatccgc
cttgttagaggagggggagcagggggcagggggcaaggggcagggggaagtagttatttg
ctagcatcttccgatcctttagcttttttgactcctactgcgcggcaagtttgggaactt
ttgcaagggcagcctgcgggggattatagtttcgcctaccttcaacaaaaagtcaaatct
gcctatcggggaattcgggagttgctgcgattcggtttagtagaaagctatttagaaccg
ccacggctgactcgaccaaagctacaaaaagcggtcatactcacaggtacaattgatagc
gacttaactacccgccagcgagagattttggaagtgctgcggcggcataatggggagttg
tggcaaaatgaattactgctaatttgcaatgctagttcttctatcctcaaaacgttgaca
caaaagggttacatcgttattgaagaacgggaagtattgcgaactgaacagggcccagta
ttagcaggtgatggggctaaatctttaactgctgcccaagctagcgctttgcaaacaatc
cagacactcgatggatttgctgaagttttattgcatggggtgacgggttcgggaaaaacc
gaagtatatttgcaagcgatcgcacctctcatcaagcaaggcaaatctgcccttgtctta
gtaccagaaattggacttacaccccagctaaccgatcgttttcgtgcccgttttggcaat
aaagtcagcgtttatcacagcgctctctccgacggtgaacgttacgacacttggcggcaa
atgctcaccggagaaccccaagttgtcattggtacgcgcagcgcagttttcgcgcctttg
cccaacttgggtttaattattttagatgaagaacacgacagcagctttaagcaagactca
cccatacctacttaccatgcccgtactgtagccaaatggcgagccgaattagaaaattgc
cctttattgttaggttctgctacaccttcgttggaaacttgggtaagcgtgggggggaag
catgggagcagaggagcaggggagcaggggagcaggggagcagggggagaattcgtaact
cctcactcctcactcagcactcagcacgggctaaacgccccgctaccgctaacatcactc
agcactcattatttaagtttgcccgaacgcatcaattctcgccctttgccgcctgtggaa
atagtcgatatgcggcaagagttgcagcagggaaatcgttctatatttagtagatcgctg
caagaagctttgcaacagttgcaagagaaaaaacaacagggaattttatttatccatcgt
cggggacacagtacttttgtctcatgccgcagttgtggatatgtgttggaatgtccgcat
tgtgatgtgtcactggcgtaccaccacaccgaagaaaaagcgccggaattattgcgctgt
cattattgtaattatgcgcgatcgcatcccaaatactgccccgattgtagttccccttac
ctgaaatttttcggtagcggtactcagcgagtaacgcaggaattagcgcgacagttccca
gagttacgcttgattcgttttgatagcgataccacccgtaacaaaggctcacaccggact
ttactcacccaatttgccaacggcgaagcggatttattagttggtacgcaaatgcttacc
aaaggtttggatttaccacaggtgacacttgtgggcgttgtcgccgccgatggattgcta
aatttatcagattatcgtgccagtgaacgggcatttcaaaccttaactcaagtcgctgga
cgtgctggtagaggagacgatccgggcagggtgattgtacaaacttacaccacagagcat
caggtaattgcagcagtgcgatcgcacgattatcactctttctcccaagctgaactagaa
caacgccaagccctcaattatcccccttatgggcggttaattttgttgcgcttaagtagt
ctcgatcctattcaagtgcaaaataccgcgcaaattattgctacagccttgagtacagaa
gaagaattcgagatattaggcccagcaccagcgagtattttacgagtagctaatcgttat
cgctggcagatattgattaaatttgctcccgatgcattaccacaattgccagattgggaa
gaagtgcgatcgctttgtccttcgtctgttagtttgacaattgatgtagacccattaaat
attatgtga
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