Nostoc sp. ATCC 53789: GJB62_06880
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Entry
GJB62_06880 CDS
T10687
Name
(GenBank) AAA family ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost03030
DNA replication
nost03430
Mismatch repair
nost03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJB62_06880
03430 Mismatch repair
GJB62_06880
03440 Homologous recombination
GJB62_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nost03032
]
GJB62_06880
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_06880
Enzymes [BR:
nost01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJB62_06880
DNA replication proteins [BR:
nost03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJB62_06880
DNA repair and recombination proteins [BR:
nost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJB62_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QHG15721
LinkDB
All DBs
Position
complement(1709946..1710893)
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AA seq
315 aa
AA seq
DB search
MTIDPFATLVGQQQAIELLTQAVRQNRVAPAYLFVGPDGVGRSLAARCFIELLFSSEMGV
TAALQNRLRQGNHPALLWVQPTYQYQGQRLTAAEAVEKGLKRKAPPVIRLEQIREITEFL
SRPPLEAPRNVVVLEEAQTMAEAAANALLKTLEEPGQATLILIAPTPESVLPTLVSRCQR
IPFYRLDAQSLAVVLTQTSHQEILQNQAVLSIAAGSAGSAIASYEQLQTIPPELLEDLKK
APASYRKALELAKKIDKDLDTEAQLWLVDYLQQLYWQRWHQPSIINQLEQSRKYLLAYAQ
PRLVWECLLLSICQK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgactattgacccatttgcaacacttgtaggacaacagcaagccatagaattactgact
caggctgtcagacaaaaccgggttgctccagcgtacctctttgtggggccagatggtgta
ggaagaagtttagcagccaggtgctttatagaattgctattttctagcgagatgggagtc
actgcggctttacaaaaccgtttgcgtcaggggaaccatccagctttgttgtgggtgcaa
ccgacgtaccaatatcagggacaacgattaacagcagcagaagcggttgagaaaggactt
aagcgtaaagcaccacctgtaattcggctagagcaaattcgggaaattaccgagttttta
agtcgtccgcctttggaagcgccgagaaatgtggtggtgctggaagaagcccaaacaatg
gcagaagccgcagccaacgctttacttaaaaccttggaagaaccgggacaggcgacgtta
attttaattgcacctacacctgagtctgttttgccaactttggtgtcacgctgtcaacgc
attcctttttatcgcttagatgcacagtctttggctgttgtacttacacaaacaagtcat
caagaaattttgcaaaatcaggcagtgctgagtatagcagctggcagtgctggaagtgcg
atcgcatcttacgagcaattacaaactattcccccggagttactcgaagatttgaaaaaa
gcccctgcttcctaccgcaaagccttggagttagccaagaaaattgataaggatttagat
acagaagcccaactgtggttagttgattatcttcagcaattatactggcagcgttggcat
caacccagtattattaatcagctagaacaatctcgtaaatacttgcttgcttatgctcaa
cctaggctggtttgggaatgtctgcttttatctatatgtcaaaaataa
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