Nostoc sp. ATCC 53789: GJB62_08655
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Entry
GJB62_08655 CDS
T10687
Name
(GenBank) trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost03030
DNA replication
nost03430
Mismatch repair
nost03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJB62_08655
03430 Mismatch repair
GJB62_08655
03440 Homologous recombination
GJB62_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nost03032
]
GJB62_08655
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_08655
Enzymes [BR:
nost01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJB62_08655
DNA replication proteins [BR:
nost03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJB62_08655
DNA repair and recombination proteins [BR:
nost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJB62_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
Intein_splicing
Nitr_red_bet_C
Motif
Other DBs
NCBI-ProteinID:
QHG16040
LinkDB
All DBs
Position
complement(2131585..2132937)
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AA seq
450 aa
AA seq
DB search
MIKIATRKYLGKQNVYDIGVERDHNFALKNGFIASNCFNKSHSTAYAYVTYQTAYLKANY
PLEYMAALLTANSGDTDKVQRYITNCTNMGIPIDPPDINRSGVDFTPTLGKILFGFSAVR
NVGQNAIACILEARNETGEFKSLADFCDRVDLRAVNRRTLESLIYCGAFDKIESNRQQLI
NDSELVYDWAQSRAKDRASGQGNLFDLLGDGFSSTQNKRANNAFETAPKSKPVTDLPPQK
KLQMEKELLGFYVSDHPLKSLRQIAPLLTPINLSQLGEQREDTRLCAVVMLNNVKKVVTK
KGDQMAILQIEDLTTQSEAVVFPKTYERISSLLQVDTRLIIWGKVDRRDEQTQFIVEDAE
PVETVQMVMVELNPQQAGDMEKLHLLKTILQEHSVDKEKAKMPVIGIIQTEKSRKLVRLG
WQFSVQDSRITVQALQNASFPAHIKSLTGS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatagccacacgtaaatatttaggcaaacaaaatgtctatgacattggagtt
gagcgtgaccataattttgcactcaaaaatggctttatagcttctaattgtttcaataaa
tcccattcgaccgcctatgcttatgtaacttatcagacagcatatttaaaagctaattat
ccattagaatatatggcggccctgttaacggctaacagtggcgataccgataaggtacag
agatatattaccaactgtacaaacatgggtattcccatagatccgccagacattaatcgt
tctggtgttgattttacgccgacattgggaaagattctgtttggcttttcggcggtgcgt
aacgtgggacagaatgcgatcgcctgtattttagaagcgagaaatgagacaggagagttt
aaatctctcgctgatttttgcgatcgcgtggatttacgtgctgttaaccgtcggactctg
gaatcgctgatttactgtggagcctttgacaaaattgaatccaaccgccaacagttaatt
aacgactcagaattagtgtatgattgggcacaatctcgcgccaaagacagagccagtgga
caagggaatctctttgacttattaggcgatggattttcttctactcaaaataaaagagca
aataatgcctttgaaactgctcctaaatctaaacctgtgaccgatttacccccacagaaa
aagttgcagatggagaaagaattattaggtttttatgtatcagatcatccactgaaatcc
ttacgacaaatagcaccacttttaactccaattaacctttcgcaattgggagagcaaagg
gaagacacaaggctttgtgcagttgtgatgttaaataacgtcaaaaaagtggttacaaaa
aaaggcgatcagatggcaattttgcaaatagaagacctaaccacacaatcagaagctgta
gtttttcctaaaacttatgaacgcattagttccttacttcaagttgacacaagattgatt
atttgggggaaagtagaccgacgcgacgagcaaactcaatttattgttgaagatgcagag
ccagtggaaacagtacaaatggtaatggtagagttaaatccccagcaagcaggtgatatg
gaaaaactacacctcttgaaaacaattttgcaagaacattcagtagataaagaaaaggca
aaaatgccagttattggaattatccaaactgaaaaatctcggaaacttgttcgcttgggt
tggcaattttccgtacaagattccagaataaccgtccaagctttgcaaaatgctagtttt
cctgctcatatcaaatcgctcactggtagctaa
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