Nostoc sp. ATCC 53789: GJB62_10040
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Entry
GJB62_10040 CDS
T10687
Name
(GenBank) ATP-dependent helicase
Organism
nost Nostoc sp. ATCC 53789
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
TPR_2
DEAD_2
TPR_1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QHG16277
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Position
complement(2450026..2454237)
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AA seq
1403 aa
AA seq
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MINLATDTTKLQTQLADKYFKLHPSIQKIIQLFSLVYAPIDKNSFVSCLSKIDALDENNK
PWVTKTLSFQIDKLLKAGLLIQESRQGAECHPLLTEIATRHAVQTGQFEILVTVVEEKLP
IHTHWNRDYRIFSSLRQCIREIRIGIYRQDLSFINQQIEAYQKYSDSEEKIVIENIFEQI
YNNPFDADWFNTLPQGLYESGISSILFNSALKLSASEDALMLLEEECSTPGKHCSDYLHL
ILTEQLLLQGCTQEAQESLERISNEYQNNAAIFRGWLSFLRGDNEQAIKYYKDALKAIKK
ATGKRQIYFNTIGGLFFILVLLKDGSAQSLKEAEEYSSLMSRQSDHWLRFTYGRLKMVLQ
VHQGDITQKQFVVSGHISSVEEENSLQTLFCSLCLYWMDAESAKKRLPNLLEPLYRRSLT
SGYHWLAMETAELLSRLKPSSNYKQLAEALREDSNIQTIVDLIRPQEAWEMCLNALANLQ
KEPQTPGKPESELRLAWFITFYPSRCVLQPKEQKVNAKGEWSKGRPIALKRLSSALSEFD
YITPQDMRVCSCIEAYSDGYYGKVDYTFGEKAISALIGHPLVFWEDTPTIRVEIVKGEPE
LLVKKGKQDRLTLEFSPKLPESQNILHIKETPTRIKVIEITAEHRRIAEIIGIDNKLNVP
AIAEKQVLAAINAVSGIVTVHSDIGGGSEGAEEVPAQTLPHIHLLPANAGLKISLLSRPF
AQGGPYYRPGTGGETVIAEIDGKRLQTRRNLSEEKQLAKDAIAACATLTRTEEQDGEWII
DEPEDCLELLLELQAQGNNVVIEWPQGEKLRVSHNADLKDFNLSIQRQQDWFAATGELKL
NNDLVLDMQQLLELLEKTPSRFIPLGDGQFLALTQAFRKRLDELRMFSEKHSKGIRFHPL
ATLGLEDFVDEVGKVKADKHWKTHIQRLHEVQNLQPELPSTLQAELRDYQMEGFCWLARL
AHWGVGACLADQMGLGKTLQALAVILRNAHEGPTLIIAPTSVCMNWVSEAQKFAPTLNII
QFSGANRQKLLDGLQPLDMLVCSYGLLQQEEVAQMLAQIQWQTIVLDEAQAIKNMTTKRS
QAAMNLKSNFKLLTTGTPIENHLGELWNLFRFINPGLLGSFESFNQRFATPIEKYQDKLA
RNKLKKLIQPFLLRRTKNQVLEELPSRTEILLHVELSREEKAFYEALRRQAISKLTESDA
EAGKKHLQVLAEIMKLRRACCNPSLVMPGTELPSSKLQLFGEVLGELLENRHKALVFSQF
VDHLHIIRDYLEQQGINYQYLDGSTSVAERKKRVDAFQAGSGDVFLISLKAGGTGLNLTA
ADYVIHTDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEEKIVQLHHQKRDLADS
LLEGTEMSGKISTEALLQLISES
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgattaatttagcaactgataccacaaaattgcaaacacaacttgcggataaatacttc
aaattacatccttccatacaaaaaatcatccaattattttcgttggtttatgcaccgata
gacaaaaattcattcgtaagttgtcttagtaaaattgacgctttagatgaaaacaataaa
ccttgggttactaaaaccctcagtttccaaattgataaattgttaaaagcaggcttgtta
atacaggaaagcaggcaaggtgctgaatgtcatccgttacttacagaaattgctactcgt
catgctgtacaaaccggacagtttgaaatcctcgtcacagtagtagaggaaaagctaccc
atacatactcactggaacagggattatcggattttctccagtctgcgccagtgtatcaga
gaaatccgcattggtatttatcgccaagaccttagttttattaatcagcaaattgaagct
tatcagaagtacagtgatagcgaagaaaaaatagtaatagaaaatatctttgagcagata
tacaataatccatttgatgcagattggtttaacaccctaccacaaggattatatgaaagt
ggtatatccagtatcctcttcaattcagccttaaaattatctgcttcggaagatgcgttg
atgctgctagaagaagaatgttctacacctggaaaacattgctcagattatctacatctg
attttgacagaacaactgttgttacagggttgtacccaagaagcacaagaaagtctagag
cgaatatcaaatgaatatcaaaataacgctgcgatctttcggggttggttaagttttctg
cggggtgataatgaacaagccatcaaatattataaagatgccctgaaagccatcaaaaag
gctacaggcaaacgccaaatatatttcaatacaattgggggcttatttttcatcctcgta
cttttaaaagatggttcagcgcaaagcctcaaagaagcagaagagtatagcagtttgatg
tcccgtcaatcagatcattggctcaggttcacttatggcagactgaaaatggtactgcaa
gtccaccaaggtgatattactcaaaaacaatttgtagtcagtggtcatatttcttccgtg
gaagaagaaaatagcttacaaaccttgttttgctcgctatgcctttactggatggatgct
gagagtgctaaaaaacgcttacctaatttactagaaccattgtatcggcgatcgctcaca
tccggttatcactggttggcaatggaaaccgcagaactcctatcccgactcaaacctagt
agtaactataaacaacttgcagaggcactgcgagaagatagcaatatccaaaccatcgta
gacttaattcgaccccaagaagcttgggaaatgtgcctcaatgccctggcaaatctccaa
aaagaaccacaaacaccaggaaaaccagaatcggaactgcgtttagcatggttcataact
ttctatcctagtagatgtgtcttacaaccaaaagaacaaaaagttaatgccaaaggggaa
tggagtaaaggtcgccccattgccctcaagcgtctaagtagtgccttatctgagtttgat
tacatcacaccccaagatatgcgggtatgtagttgtattgaggcatatagtgatggctat
tacggcaaagttgattataccttcggtgaaaaagccatctctgctttaattggacacccg
ttggttttttgggaagatacacctaccatccgtgtagaaattgtcaagggagaaccggaa
ctactggttaaaaaagggaaacaagatcgtctcaccttggaattttctcccaaattacca
gaatcacagaatattctgcatatcaaagaaactccaacccgcatcaaagtcattgaaatt
actgccgaacacagacgcattgcagagattattggtatagataataaattaaatgtgcct
gcgatcgcagagaaacaagttttagcagccattaatgccgtctctggcatcgtcactgta
cattctgacattggtggcggttcagaaggtgcagaagaagtacccgcccagactctaccc
catattcatcttttacctgccaatgccggcttgaaaatcagccttttgtcgcgccccttt
gcccaaggtggtccctactaccgtcctggaacaggtggtgaaactgtaattgccgagatt
gacggtaaacgtctccaaaccagacgaaatttgtctgaagaaaagcaacttgccaaagat
gctatagccgcctgcgccaccttgactcgaactgaagaacaagatggtgaatggattata
gacgaacccgaagactgtttagaactgctgctagaactgcaagcacagggaaataacgta
gtcatagaatggccacaaggagaaaaactgcgtgttagccacaatgcagacttgaaagac
tttaatttatcaattcaacgtcagcaagattggtttgcagccactggggagttgaaattg
aataacgacttagtgctggatatgcagcaactactagaactattagagaaaacccccagc
cgatttatcccccttggtgatggtcaatttttggctttaactcaagcttttcgaaaacgc
ctcgacgaattacggatgttttcagaaaaacatagtaaaggtattcgttttcacccatta
gcaacattagggttagaagattttgtcgatgaggtaggtaaggtaaaagcagataaacac
tggaaaacacatatccagcgtctccatgaggtgcaaaacctccagccggaactgccatct
acccttcaagcagaactacgtgactaccagatggaaggtttttgttggctggcgcggcta
gcacattggggtgtgggtgcttgtttagcagaccaaatgggactcggtaagaccttgcaa
gcattggcggtcattctcagaaatgcccatgaagggccaaccctaattattgcccccact
tctgtatgtatgaattgggtgagtgaagcgcagaagtttgccccaactctcaatattatt
caattttctggtgctaaccgccaaaaattattggatggtttacaacctttagatatgttg
gtatgcagctatggtttattacagcaggaagaagtagcgcaaatgcttgctcagatacag
tggcaaactattgtcctagatgaagcccaggcaattaaaaatatgaccactaaacgttct
caagcagccatgaacctaaaatctaattttaagttgctgactactgggactcccattgaa
aatcacctgggtgagttgtggaatttgttccgctttattaatcctgggttattgggttct
tttgaaagcttcaatcaacgctttgctacccccattgaaaaatatcaagataaacttgca
cgtaataaactcaaaaaactgattcaaccatttctgttgcggcggacaaaaaatcaagta
ttagaagagttaccatctcgtaccgaaattctccttcatgtagagttaagtcgagaggaa
aaggcattctatgaagcattgcgccgtcaggcaatatctaaactgaccgaaagtgatgca
gaagcaggaaagaaacatttgcaggttttagctgagattatgaaactgcgtcgcgcttgc
tgtaatcctagtttagtgatgcctggtactgaattacccagttccaaattgcaacttttt
ggtgaggtgctaggtgaactcctggaaaatcgtcataaagcgttagtgtttagtcagttt
gttgaccatttgcacatcatccgcgattacctcgaacagcaaggtattaattatcaatat
ctagatggcagtacttcagtggcagagcgcaaaaaacgggtcgatgcgttccaagctggt
tcaggggatgtctttctgattagtctcaaagcaggggggacaggacttaatctaactgcg
gctgattatgtgattcatacagatccttggtggaatcccgcagtggaagaccaagcctca
gaccgcgcccatcgcatcgggcaacaacgcccggtgacaatttatcgcttggtagcaaag
gatactatcgaagaaaaaattgtgcaattgcatcaccagaaacgagatttggcagatagc
ctgctggaaggtactgagatgagtggcaagatatcaacggaagctttgttacagttaatt
agtgaaagttag
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