Nostoc sp. ATCC 53789: GJB62_14685
Help
Entry
GJB62_14685 CDS
T10687
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost03410
Base excision repair
nost03430
Mismatch repair
nost03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJB62_14685
03430 Mismatch repair
GJB62_14685
03440 Homologous recombination
GJB62_14685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_14685
DNA repair and recombination proteins [BR:
nost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GJB62_14685
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GJB62_14685
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GJB62_14685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QHG17094
LinkDB
All DBs
Position
3611234..3613372
Genome browser
AA seq
712 aa
AA seq
DB search
MLDRPVSEFSKPTRRLPNQRWQIYPQKPEFAQKLAVLINVSPIISQLLINRGMETPEQAQ
AFLNPESLVLPSPLEDFPDLAISLELLQNAIASQTKIAICGDYDADGMTSTALLLRSLRT
LGAQVDYAIPSRMHEGYGINKRIVEEFHSEGVGLILTVDNGISAFEPVARARELGLAVII
TDHHDIPQKLPPANAILNPKLIAESSPYRGVAGVGVAYILAVSLAQQLGETKGLIQPMLA
LFTLGTIADLAPLTGVNRRWVKRGLQHLPKSNLAGIQALIQVGGVQARGEERAGEQGSRG
AGEEIANTSTSLSTSPKSKVQNPKSLKPEDIGFRLGPRINAIGRIGNPQTVIELLTTDDM
GVALERAMQCEQINASRQEMCQQIEQEAIAYVEAEFVTSLQQDRVLIVVQPNWHHGVIGI
VASRLVERYGVPVFIGTYEDGEHIRGSARSIPEFNVFEALEYCHDLLGKYGGHKAAGGFS
LPAENLQMVRSRLIEFANQCLEPQHLKPLLKIDAEVNLDQINQQLYQQLNALHPCGMDNP
DPVFWTANVQVVEQKIVGKGHIKLTIAQTIDNQEYRIKAIAWRWGDYFRLPPRVDVAYKL
RENYFNGNTTIELELIGVRLPIQIQQFFASSPIQSSTTFEYNQRQYTCGFYKNGIEAELR
IKNSEGKVLAMQPGHIIGLLGTNRQNAKEVDISQPQYDSIIQAALQALSVKS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgctagaccgacctgtatctgaattctcaaaacctaccaggcgcttacctaatcagcgc
tggcaaatttatccacaaaaaccagaatttgcccaaaaactggcggttttgattaatgtt
tcacccattatcagccagttgttgattaatcggggtatggaaacgccagaacaagcacaa
gcatttttaaatccagagtctttagtcttaccttcgccgttagaagatttcccagatttg
gcgattagtttggagttgttgcaaaatgcgatcgcttctcaaacaaaaattgctatttgt
ggtgactacgatgctgatgggatgaccagcacggctctacttttgcgtagtctccgcact
ttaggcgcacaggtagattatgctattcccagccggatgcacgaaggctacggtattaat
aaacgcatagttgaagaatttcacagtgaaggtgtaggattaattctgactgtagataat
ggcatctctgcgtttgaaccagtcgctagagctagagaacttggtcttgcagtgattatc
accgatcaccacgatatcccccaaaaattaccgccagctaatgctatcctcaaccctaaa
ctaatagccgaatcgtcaccctataggggtgttgctggtgttggtgttgcctatattttg
gcagtgtctttagcacaacagctaggcgagacgaagggattaatccagccgatgctagca
ctgtttacactaggaacgatcgcagatttagctcccttaactggcgtaaatcgccgttgg
gtgaaacgtggtttacagcatttacccaaatccaacttagctgggatacaggcgttaatt
caggtaggcggtgtgcaagcgaggggagaggagagagcaggggagcaggggagcagggga
gcaggggaggaaattgccaatacttcgacttcgctcagtacaagtccaaaatccaaagtc
caaaatccaaaatcgctcaagcctgaagatatcgggtttcgcctggggccacgaattaat
gctatcggtcggattggtaatccccagactgtgattgaattgctgactacagatgatatg
ggggtggcgctggaaagagcaatgcagtgcgaacaaatcaacgcttctcgccaggaaatg
tgtcagcaaattgaacaagaagcgatcgcttatgtagaagcagaatttgttacatctcta
caacaagatcgtgtattaattgttgttcaacctaattggcatcacggcgttattgggatt
gtcgcctcccgcttggtagaacgctacggtgttcctgtattcatcggtacttatgaggat
ggggaacatatacgcggttctgcacgctcaattccagagtttaatgtgtttgaagctttg
gaatattgccacgatttactagggaaatatggcggacacaaagccgccgggggattctct
ctaccagcagagaatttacagatggtgcgatcgcgtttgattgagtttgctaaccagtgt
cttgaaccccagcatctcaagcctctgctcaaaattgatgccgaagtcaacctcgatcag
atcaatcagcagctttaccaacagcttaatgctctacatccttgcggtatggacaacccc
gatccagttttttggacagctaatgttcaagtggttgagcaaaaaatcgttggtaagggt
cacatcaaactgacaattgcccaaactattgataatcaggagtacagaattaaagcgatc
gcttggcgttggggcgactacttccgcttaccgccgcgagtggatgtagcttacaaactg
cgagaaaattattttaacggcaacaccaccatcgagctagagttaatcggtgttagactg
ccaattcagattcaacaattttttgcttcttcacctatccagtcaagcaccacctttgag
tacaaccagcgacaatatacttgtggtttttataaaaacggtattgaagcagaattaaga
attaaaaattctgaaggcaaagtcttagccatgcagccaggacatataatcggtttactt
ggtactaatcgtcaaaacgctaaagaagttgatatttctcagccacagtatgacagtatt
attcaagctgcacttcaagcgttgtcagttaagagttag
DBGET
integrated database retrieval system
