Nostoc sp. ATCC 53789: GJB62_19555
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Entry
GJB62_19555 CDS
T10687
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost03030
DNA replication
nost03430
Mismatch repair
nost03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJB62_19555 (dnaX)
03430 Mismatch repair
GJB62_19555 (dnaX)
03440 Homologous recombination
GJB62_19555 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nost03032
]
GJB62_19555 (dnaX)
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_19555 (dnaX)
Enzymes [BR:
nost01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJB62_19555 (dnaX)
DNA replication proteins [BR:
nost03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJB62_19555 (dnaX)
DNA repair and recombination proteins [BR:
nost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJB62_19555 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
Intein_splicing
AAA
DnaA_N-like_STI
DNAX_ATPase_lid
RuvB_N
AAA_22
PT-HINT
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QHG17962
LinkDB
All DBs
Position
complement(4760127..4763534)
Genome browser
AA seq
1135 aa
AA seq
DB search
MSYEPLHHKYRPKSFAELVGQEAIATTLTNAIGTSKIAPAYLFTGPRGTGKTSSARILAK
SLNCLKSDRPTAEPCGVCDVCQGITKGYALDVIEIDAASNTGVDNIRELIEKAQFAPVQC
RYKVYVIDECLTGDSLVLTDEGLQRIDDPKIKDKKVLSYNDSLGKWEFKKVVRWLDQGER
QTLVIKTTNREIRCTGNHLIRTNQGWLPAKDVKEGVKILSPVNADAASSFTNLVSMDAPE
GLLADTNLKAIHLGKNHTTWNLSLNKPNYSDLSVLAGAEKSSISQPFYKKKDEESSASSL
VGKNIHIKKDTESGNLEQKSSLRMRQLSSQTHLDLSTEPYLEIALSVIPINTADSPDCVG
HTQKSSKNGWNTKLIALKNCVQNCELQVTKDTGTYQLPVTPLVIPNSKMSWKSLNQMGIK
SSSLWTGLIELPQKDLLGGTWMMAHSVSVHKEVHKFNCIQKDSPALKINSSPVGLQQWDI
QPQQSFIPEVVQAKHTTTSRWAQAPVENGSQTLNNIPSPQWITSLETVESVHLAGVERVY
DIEVADNHNFVANGLLVHNCHMLSTQAFNALLKTLEEPPRHVVFVLATTDPQRVLPTIIS
RCQRFDFRRIQLEAMVKHLSAIASYESIHISPEAVTLVAQLSQGGLRDAESLLDQLGLLA
GEVTPDRVWDLVGTVSEQDLLGLLNAIAQDKPEAVLDSTHKILDRGREPLILLQNLAAFY
RDLLIAKTAPNRHDLVACTQQTWTALVEFAQYFDMSVILAGQEHLRKAEVQIKNSTQPRL
WLEVTLLGLLPSATANIQPQVPNIAPRVNPPAVSPSYPPAVTQNHAVSSLPVTEPQTNHN
STLRQGSVTTNHHVAIAQNEPVTSSGAVEQQTNHNSAPNSVSPPTPELVTVPVSPANVEA
VTSEVVGEAQYDLTQVWQQVRANFPMPSRQALLGQMCQLIEFNGTVARIAVKGSKWYETL
KSDLPMMKAAFQQTFGCEVQVNLEQISSVTPNSARKTPPPKDSSRVQQPATPSYSQQISP
PAPVPQPATPAPAPFKTEPLAKNGNGTNGNGVNGNGASGNGASGNGANRNGAQTLPPAPQ
RTPGSDWEIDEVAIAAQRLAEFFNGQIIRFTEDSTEFSDSIATPEWVEESEVDDE
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgaacccctgcaccataaatatcgccccaaaagttttgctgaactggtggga
caagaggcgatcgctaccaccctcacgaatgcgatcggcacatccaaaatagcccccgcc
tatttatttacagggccaagaggtacggggaaaacttctagtgcccggattttagctaaa
tctctcaattgtctcaaaagcgatcggcccactgctgaaccctgtggcgtgtgtgatgtt
tgtcaaggaatcaccaagggttacgctttagatgtaattgaaatcgatgctgctagtaac
actggtgtcgataatatccgcgagttgattgaaaaagcccagtttgcccctgtgcagtgt
cgttacaaggtttatgtaatcgatgaatgcttaactggagattctctggttttgactgac
gagggacttcaaagaattgatgatcccaaaattaaagataagaaggttctgagttacaac
gactcattaggtaagtgggaattcaagaaagttgtcaggtggttagatcaaggggaaaga
caaaccctggttatcaaaacaactaatagagaaattagatgtacgggtaatcatttaatt
aggacaaatcagggatggctaccagcaaaggacgtaaaagaaggagtgaagatactatcc
cctgtgaatgcggatgcggcatcctcatttacaaatttggtatcgatggacgcacccgaa
ggtttgttagcggacaccaatttaaaggcaatacatctgggcaaaaatcatacgacttgg
aatctatccttaaacaagccgaattactccgacctttctgtgcttgcgggtgcggagaaa
agctcgatatcccaacctttttacaaaaaaaaggacgaggaatcatcagcatccagtctc
gttgggaaaaacatccatataaaaaaggacacggaatctggaaacttagaacagaaaagt
tccttgcggatgcggcagttatccagccaaacgcacttggacttatctacggaaccttac
ttggagattgctctatcagttatcccaataaatacagcagattccccagattgtgttgga
cacactcagaaaagcagcaagaatggttggaatacaaagcttatcgccttgaagaattgc
gtccaaaactgcgaattacaggtaacaaaggatacgggaacatatcagttacctgtaaca
ccgcttgtcatccccaactcaaagatgtcttggaaatcgttaaaccaaatggggataaaa
agctcgtctctatggactggcttaatcgaattaccccagaaggacttgcttggtggtaca
tggatgatggctcactcagtctcagtccacaaggaagtccacaaattcaattgcatacag
aaggattctccggcgctgaaaatcaactcatcgccagttggcttacagcaatgggatatt
cagccgcaacaaagttttataccagaagtagtacaggcaaaacataccactacatccaga
tgggcgcaagcaccagtagaaaatggctcgcagaccttaaacaatattccatcccctcaa
tggattacaagtttggagacagtcgaatctgttcacctcgctggggttgagcgagtttac
gatattgaagtagcagataatcataactttgtagcaaacgggcttttggtacataattgc
cacatgctcagtacccaagcgttcaatgcgctacttaagaccctagaagaaccaccgaga
cacgtggtttttgtattggcgacaacagacccgcaacgggtgttaccaacgattatttcg
cgctgtcaaaggtttgattttagacgtattcaattagaggcgatggttaagcatttaagt
gcgatcgcatcttatgaaagcattcatatttcacccgaagccgtaaccctggtagcccaa
ctttctcagggagggttgcgagatgccgaaagcttactcgatcaattgggtttgttagcg
ggtgaagtgacaccagatagagtttgggatttggtcgggacggtaagcgaacaggactta
ctgggacttctaaatgcgatcgctcaagataaacctgaagcagttcttgacagtacccac
aaaattcttgatcgtggtcgagaacccctaattcttctgcaaaatctcgccgctttctac
cgcgatttactcatagccaaaacagcaccgaaccgccacgatttagttgcttgtactcag
caaacctggacggcgttggttgagtttgctcaatacttcgatatgagcgtgattttggca
ggacaggaacacctacgaaaagctgaagtgcaaattaaaaacagcacccagccgcgtttg
tggttggaagtaacattactaggattgttacccagtgcgacggcaaatattcaaccacaa
gttccaaatatcgcgccgcgagttaacccacctgctgtatctccaagctatcctccagca
gttacccaaaatcatgcagtctcttctttaccggtaacggaaccgcaaacaaatcataac
tctacacttcgacaaggctcagtgactacaaaccatcatgtagcgattgcccaaaatgag
cctgtcacttcatctggcgcagttgaacagcaaacaaatcacaattctgctcctaactca
gtttcaccaccaaccccagaacttgtaactgtacccgtatcgcctgcgaacgttgaagca
gtaacttcagaagttgttggagaagcacaatatgatttaacgcaggtttggcaacaggtg
cgggctaattttccaatgccttccagacaagctttactggggcaaatgtgccagctaata
gagtttaacggtactgtagcgcgtattgctgttaaaggatctaaatggtatgaaacactt
aagtctgatctcccgatgatgaaggctgctttccagcagacttttgggtgtgaagttcag
gtaaatctggaacaaataagctctgtaactcctaactcagctaggaaaactcctccgcca
aaagactctagtcgtgttcagcaaccagctactcctagttacagccagcaaatttcgcct
ccagcgccagtaccacagccagcaacgccagcaccagcaccattcaaaactgagccgcta
gcaaaaaatgggaatgggacaaatggaaatggggtaaatggaaatggagcaagtggaaat
ggagcaagtggaaacggggcaaatagaaatggggcgcaaactttgcctccagcgccacag
cgaacacccggatctgattgggaaattgatgaagttgcgatcgctgctcaacgtctagca
gaattcttcaacggacaaattatccgtttcactgaggattcaacagaattctccgattcc
atagctacacctgaatgggtagaggaatcagaagttgatgatgagtga
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