Nostoc sp. ATCC 53789: GJB62_19915
Help
Entry
GJB62_19915 CDS
T10687
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost03410
Base excision repair
nost03430
Mismatch repair
nost03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJB62_19915
03430 Mismatch repair
GJB62_19915
03440 Homologous recombination
GJB62_19915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_19915
DNA repair and recombination proteins [BR:
nost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GJB62_19915
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GJB62_19915
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GJB62_19915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
HTH_11
LysX_preATP_grasp
Motif
Other DBs
NCBI-ProteinID:
QHG18024
LinkDB
All DBs
Position
complement(4851386..4853827)
Genome browser
AA seq
813 aa
AA seq
DB search
MPEQQQWTITATEQPPEWFIQAVKQHTPASSGIYAAQLLWQRGIKDNQQLTAFINYKAYQ
PASPFEFGQEMDLAIARLQHAYNAKEKIAIWGDFDADGITATSVLWDGLGQFFKQNTQLI
YYIPNRLKESHGLNNQGIDNLAKQGCKLIVTCDTGSTNIEEIIYAKQLGIDVIVTDHHTL
PTERPSVAAIINPRYFSREHQLFNLSGVAVAYKLVEALYKSLPNVAKHPLEDLLDLVAVG
LIADLVQLSGDCRYLAQLGIQRLQEDFKQPPAARRRPGVGRLLELCQKSGDRPTDISFGL
GPRINAVSRIQGDASFCVELLTSRDVKRCNELAEVTELANTRRKSLQKDVQAQVAQKLTQ
LDLSTTSVIVLEDAQWPAGVLGLVAGQVAQETGRPTILLSTEIAGEQGSRGAGGEITSLS
NSELSTQHSALLLARGSARSVNSVDLYQLVKDQAHLLHRFGGHPFAAGLSLLVENIPLFT
AAINQQLRQSLGSTTLTPTVQADLTVTVADLGKELFLELKVLEPCGMGNPVPKLLIQNCW
FENAWHRNQQDWQGKKVQYIKTEFDIRDDSGRSAFPGLWWGHYKDELPIGRCDCIAELDY
NTFKKRYEIRLIAVRPSVNSALNTQHSPLILDLRNQEYSQATANTTQDLALILEDCPTSW
DNLRLWLRRCLAISRSASTLSNQQQLAIAWSKPNHQPPNQIWLTLVGIAKYLSRTNQPVT
RVQLLEKIGISDQTLLVGIKALKHLGFTIKRQDNYLQFTWHPSDRAENLADEAVARFLAA
VREEQFQQQYFADVPLSTIVAIANSDNYMSTNL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacaacagcagtggactataacagcaaccgaacaacccccggagtggttcatc
caagcggtgaaacagcatacacccgcatcaagtggaatatatgcagcacaattgttgtgg
caacggggaattaaagataatcaacaattaacagcttttattaactataaagcttatcaa
ccagcgagtccctttgagtttgggcaagaaatggacttagcgatcgcacggttgcaacat
gcatataacgctaaagaaaaaatagctatctggggagactttgatgctgatgggattacc
gctacatctgtactttgggatggattagggcaattttttaaacaaaatactcagttaatt
tactatattcccaatcgcctaaaagaatctcacggtctcaataatcaaggtattgataac
ttagcaaaacaaggttgtaaattaattgttacttgtgatactggcagcacaaatattgag
gaaattatctacgcaaaacagctaggcatagatgtaatagttacagaccatcatacttta
ccaactgaacgcccatccgtcgcagcaattatcaatccccgctatttttcaagggaacat
cagttatttaatctttctggggtagcggtagcttataagttggtggaggcactatataaa
agtctgcctaatgttgcaaaacatccgttagaggatttattagatttagtagcagtagga
ttaattgccgacttagtgcagttaagtggagattgtcgttatttggcgcaattgggaatt
caacgactacaagaagattttaaacagccaccagcagcgcgtcgtcgtccgggagtggga
cgattattagaattgtgccagaaaagtggcgatcgccccacagatatttcctttggtttg
ggcccaagaattaacgctgttagccgcatccaaggtgatgccagtttttgcgttgaatta
ttaaccagtcgagatgtcaaacgttgtaacgaattagccgaagttacagaactcgcaaac
actaggcgcaaatctttgcaaaaagatgtacaagcgcaagtagcacaaaaacttactcaa
ttagacttatcaaccaccagcgtcatcgtcctagaagatgcccaatggcctgcgggtgta
ttgggtttagttgctggacaggtagcacaagaaacaggtcgtccgactattttgttaagt
acagaaatagcaggggagcaggggagcaggggagcagggggagaaattacttctttatct
aactcagaactcagcactcagcactcagcactcttattagcccgtggttccgcccgttcg
gtgaattctgtagatttataccaactggtaaaagaccaagcacatttgttacatcgcttt
gggggacatccctttgcagcaggtttgagtttgttagtagagaatattcctttatttaca
gcagcgattaatcagcagctgcggcaatctttaggtagtacaaccctaacgccaactgtg
caagcagacttgacggtgacagttgcagacttgggaaaagagttatttttagaactgaaa
gtgctagaaccttgtggaatgggtaatcctgttccgaagttgctaattcaaaactgctgg
tttgaaaatgcttggcatcgcaatcagcaggattggcaagggaaaaaggtacagtacatt
aaaactgagtttgatattcgggatgattctggcagaagtgcttttcctggcttatggtgg
ggacattacaaagatgaattgcccataggaaggtgtgattgcatagctgaattagactac
aacacctttaaaaaacgttatgaaatcagattaattgctgtgcgtcccagtgttaactca
gcacttaacactcaacactcaccactaattttagacttacggaatcaggaatactcacag
gctacggctaacacaactcaagacttagcgttgattcttgaagattgtcccacgagttgg
gataatttacgcctatggttgcggcgatgtctagccataagccgttccgcgtctacgctt
tctaatcaacaacaattagcgatcgcttggtctaaacccaaccaccaaccacccaatcaa
atttggttgactcttgtcggaattgccaaatacctcagccgcacaaatcaaccagttacg
cgcgtccaacttttagagaaaatcggcatcagcgatcaaactttacttgtaggaattaaa
gccttaaaacatttagggttcacaatcaaacgacaagacaattatttacaatttacctgg
catccgagtgatagggcagaaaaccttgctgatgaagcggtggcaaggtttttagctgct
gtccgagaagaacaatttcagcaacagtattttgctgacgtgcctttatctactattgtg
gcgatcgcaaattccgacaattatatgagtacaaacctttaa
DBGET
integrated database retrieval system
