Nostoc sp. ATCC 53789: GJB62_20760
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Entry
GJB62_20760 CDS
T10687
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GJB62_20760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nost03021
]
GJB62_20760
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_20760
Enzymes [BR:
nost01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GJB62_20760
Transcription machinery [BR:
nost03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GJB62_20760
DNA repair and recombination proteins [BR:
nost03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GJB62_20760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
KH_PARP14_8
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QHG18174
LinkDB
All DBs
Position
5037490..5038437
Genome browser
AA seq
315 aa
AA seq
DB search
MAQFQIECVESNTEESRNHYSKFVLEPLERGQGTTVGNALRRVLLSNLEGTAVTAVRIAG
VSHEFATVPGVREDVLEILMKMKEVILKNYSSQPQIGRLLVSGPATITAAHFDLPSEVEV
IDQTQYVATIAEGGKLEMEFRIEKGKGYRTVERGREEATSLDFLQIDSIFMPVRKVNYSV
EESRGEGLIPKDRLLLEVWTNGSISPQEALSSAAAILVDLFNPLKDISLEPTDTGSDIPD
DPTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDYTQEDLLEIKNFGQKSAEEVVEALQR
RLGITLPMERGSKHP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcagattgaatgtgtagagtcgaatactgaagaaagtcggaaccattac
agtaaatttgttctggaacctctagaacgcggtcaaggaacaacggttggcaacgcacta
cggcgggttttactgtctaacctagaaggtacagcagttacagcagtgcggattgcaggc
gtttcacacgagtttgccacagttccgggcgtgcgggaagatgtactggaaatcctcatg
aaaatgaaggaagttatcctcaaaaactattcctcacagcctcagattggtagattactc
gttagcggcccagcaacaattactgcggcacattttgatttacctagtgaagtagaagtc
atcgatcagacccagtatgtagccaccatcgctgaaggtggaaagctggaaatggaattt
cggatcgagaagggcaaaggctatcgcactgtagagcgaggacgtgaggaagccacatcg
ttggattttctccaaatcgactcaatatttatgccagtgcgaaaagtcaactatagtgtt
gaagaatctcgtggggaaggcttgattccaaaagaccgactactgttggaagtttggaca
aatggcagtatttctcctcaagaagcactatcttctgctgctgcgatcttggtagattta
ttcaacccgttgaaagacatctccctagaaccaacagacacaggttcggatattccagac
gatccaactgcccagatacccatcgaagagttacaactttccgtgcgggcatataactgt
ctcaaacgggcacaagttaactctgtggcagatttgttggattatacccaagaagacctc
ttagaaattaagaactttgggcagaaatcagcagaagaagtcgtggaagctttgcagcga
cgcttgggcatcaccctgccaatggaaagaggctctaaacacccttaa
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