Nostoc sp. ATCC 53789: GJB62_21610
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Entry
GJB62_21610 CDS
T10687
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost03018
RNA degradation
Brite
Enzymes [BR:
nost01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GJB62_21610
Messenger RNA biogenesis [BR:
nost03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GJB62_21610
Ribosome biogenesis [BR:
nost03009
]
Prokaryotic type
rRNA helicases
GJB62_21610
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QHG18311
LinkDB
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Position
5220040..5221569
Genome browser
AA seq
509 aa
AA seq
DB search
MTLSFQELGISQERVAQLEKIGFTEPTNIQVQAIPQLLGGRDVVGQSQTGTGKTAAFSLP
ILERLDINQKAVQAIVLTPTRELAMQVHDAIAQFIGDEGLRVLAIYGGQSIDRQMLQLRR
GVHMVVGTPGRVIDLLDRGCLKLDQVKWFVLDEADEMLSMGFIDDVIKILSQAPVDRQTA
LFSATMPPSIRMLVNKFLRSPATVTVEQPKAAPNKINQVAYLIPRHWTKAKALQPILEME
DPETALIFVRTRRTAAELTSQLQGAGHSVDEYHGDLSQQARERLLVRFRNRQVRWVVATD
IAARGLDVDQLSHVINFDLPDSVETYVHRIGRTGRAGKEGTAISLVQPFERRKQQTFERH
NRQSWQLLTIPTRAQIEARHILKLQEQVREALTGERLASFLPIVSELIEEYDAQAIAAAA
LQIAYDQTRPAWLSSDVEIPQEESSAPKPRLGKRRDSSSDRPRSAWKSDSNNGEERHSSP
KPKLRTSGNESSASPSKKIGSPTARESAS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgactctttcattccaagaattaggcatttcccaagaacgtgttgcacaactagaaaaa
atcggttttaccgaaccaactaacattcaagtccaagcaattccccaattgctgggtggt
cgtgatgtagtcggtcaatctcaaactggaacaggcaaaaccgcagcattttcactgcct
attttagagcggctagatattaatcaaaaagccgtacaagccatagttttaacaccaact
cgtgaattagcaatgcaggttcacgatgcgatcgcccaattcatcggcgatgaaggattg
cgggtgttagcaatctatggtggtcaatcaattgaccgccagatgctacaactcagacgt
ggcgttcacatggttgtgggcactcccggacgggtgatcgatttactcgatcgcggctgt
ttaaagctcgatcaagtgaagtggtttgtgttagatgaagccgatgaaatgttgagcatg
ggctttattgatgatgtaatcaaaatcctctcacaagcgcccgtagatcgccaaacagct
ttattctcggcaacaatgccaccatcgattcggatgttggtgaacaagttcttgcgatcg
cctgcaactgtcaccgttgagcaaccaaaagccgctcctaacaaaatcaatcaagtagct
tacttgatcccccgccactggacaaaagctaaagctttacagccgattctggaaatggaa
gatccagaaacagccttaatctttgttcgcaccagacgcacagccgccgaactcaccagt
cagttacaaggcgctggtcacagtgtcgatgaataccacggtgacttgtcacaacaagcg
cgggaacgtttattagttagattccgtaaccgtcaagtccgttgggtagtagcaactgat
attgcagcacgagggttagatgtggatcaactctcccatgtaatcaacttcgacttaccc
gatagcgtagaaacctacgtccaccgtattggtcgtactggtcgtgctggtaaagaagga
acagcaatttctttagtacaaccatttgagcgtcgcaaacagcaaacatttgaacgtcat
aaccgtcaaagttggcaattgctgaccattcctacacgcgcacaaattgaagcgcggcac
atcctgaaactgcaagaacaagtgcgggaagctttgacaggtgagcgtttggcttcattc
ttgccaattgttagcgaactaattgaagaatacgatgctcaagcgatcgccgcagccgca
ttgcaaatcgcttacgatcaaactcgccccgcttggttgagttcagatgtggaaattccc
caagaggaatcttctgctcccaaaccaagactcggcaagcgtcgtgactcttccagcgat
cgcccccgttcggcatggaaatcagatagtaacaatggtgaagaaagacattcttctccc
aagcccaaactgcggacaagtgggaacgagtcttctgcatcccctagtaaaaagataggt
tcacctacagctagagaatcagcttcttag
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