Nostoc sp. ATCC 53789: GJB62_21910
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Entry
GJB62_21910 CDS
T10687
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nost Nostoc sp. ATCC 53789
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nost03032
]
GJB62_21910 (topA)
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_21910 (topA)
Enzymes [BR:
nost01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GJB62_21910 (topA)
DNA replication proteins [BR:
nost03032
]
Prokaryotic type
DNA Topoisomerases
GJB62_21910 (topA)
DNA repair and recombination proteins [BR:
nost03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GJB62_21910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
DUF6429
Motif
Other DBs
NCBI-ProteinID:
QHG18367
LinkDB
All DBs
Position
complement(5290920..5293580)
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AA seq
886 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPAGYRVEASMGHVRDLPQSASEIPAAVKGETWAQLGVNVD
ADFEPVYVVPKDKKKIVTQLKEALKDVDELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITQEAIKKALKNCRQIDEQLVRAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVTRERQRRAFHEGTYWDLKASLSKEKTPFAAQLVTLAGTKIANGSDFDATTGQ
ITAGRNVLLLNEEQAVALKERLTGKTWSVTDIEERPVTRKPSPPFTTSTLQQESNRKLRL
SARDTMRVAQNLYEQGYITYMRTDSVHLSDQAIAAARSSVEKLYGQQYLSPQPRQYTTKS
KGAQEAHEAIRPAGSTFRTPQETGLGGRELAVYDLIWKRTVACQMADSRQTQISVQLQVE
DAGFRSSGKRIEFPGYLRAYVEGSDDPEAALEDQEVILPNLKVGDHPNCTDLEAVGHETQ
PPARYTEASLVKTLESEGIGRPSTYASIIGTIIDKGYAHLVSNALIPTFTAFAVTDLLEK
HFPDIVDPSFTSKMEQTLDDIATGEAKWLPYLQKFYLGEKGLETLVKERESQIDATTART
VELENLDAKVRIGKYGPYIEVTNGEGVITASIPKDLTPADLDPKQVEVLLRQKITGPDQV
GRHPETGEPIYVKIGAYGPYVQLGDKTDENPKPKQASLLKGVTPETVTLEMAVGLLALPR
TLGVHPVTGSKIQASLGRFGPYVVHDQGKEGKDYRSLKAADNVLTISLERALELLSEPKK
GRSSTNSKSKAALRELGPHPEDAETINIYDGPYGPYIKHGKTNVSIPEGQTVEDITLTEA
LNLLAAKASTAKSTRKTTKSTTSKSKSTAKSTAKSTTAAKKKVTEG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctcgtcatcgtcgaatctccaaccaaagctcgtaccattcgcaactacctg
ccagcaggctatcgggtggaagcgtctatgggtcatgtgcgtgacttaccccagtcggct
agtgaaattcctgctgccgtcaagggggaaacatgggcgcagctaggggtaaatgtggac
gccgactttgaaccggtatatgttgtcccgaaagacaaaaagaaaattgtcacccagctt
aaagaagcccttaaagatgtagatgaactgattctggcaacggacgaagaccgggaaggt
gaaagcattagttggcatttataccaattgctgaagccgaaagttcccactaagcggatg
gtgtttcacgaaattacccaagaggcaatcaaaaaagctctgaaaaactgccgccaaatt
gatgagcagttggttcgcgcccaagaaacgcggcgaattttagatcgactcgtgggttat
accctgtctcccctgctatggaaaaaaatcgcctggggattatctgctgggcgggtgcaa
tctgtggctgtgcggcttttagttactagggaacgccaacgccgtgctttccatgagggt
acatactgggatttgaaagccagtttgtcaaaggaaaaaaccccctttgctgcccagttg
gtaacattggcaggaaccaaaattgctaacggcagtgattttgacgcaacaactggacaa
attaccgcaggtcgtaatgtcttgttgctcaacgaagagcaagcggtagccctcaaggaa
cgcctaacagggaaaacctggagtgttaccgacattgaggaacgcccagtaacgcgcaaa
ccgtcgccaccgtttaccacctcgacgttgcaacaagaatctaaccggaaattgcgcctc
tcagcccgtgacacaatgcgggttgcccagaatttgtacgaacaagggtatattacctat
atgcggacagattcggtgcatttgtcagatcaagcgatcgcagctgctcggagttctgta
gaaaagctttatggtcaacaatacctcagtccccaaccccgccaatacaccaccaaatcc
aaaggcgcacaagaggcgcacgaagcaattcgtccagccggtagcaccttccgcactccc
caagaaactggtttgggcggtcgagaacttgccgtttacgatttgatttggaagcggact
gtcgcctgtcaaatggctgattcccgccaaactcaaattagcgtgcaattgcaagttgag
gatgctggattccgttcttctggcaaacggattgaatttcctggatatttacgtgcttac
gtcgaaggttcagatgacccagaagcagcactggaagatcaggaagtaattttgcccaat
ctgaaagtcggagatcatccgaattgtacagatttagaagcagttgggcacgaaactcaa
cccccagctagatacaccgaagcttctttggtgaaaaccttagaaagtgaaggtatcggt
cgtcccagtacctacgccagcatcattggcaccatcatcgacaaaggttatgcccatttg
gtgagcaacgctctcattcctaccttcaccgctttcgccgtcaccgacttactggaaaaa
catttcccagacatcgttgatcctagttttacctcgaagatggagcaaacccttgatgac
attgccacaggtgaagcgaaatggctaccctacttgcagaaattctatttgggagagaaa
gggttggaaaccctggtaaaagaacgggaaagtcaaattgatgccaccacagctaggact
gtagaactggagaatctagatgccaaagtccgtattggtaaatatggcccctacattgaa
gttacaaatggtgagggggtaatcaccgcctcaattcccaaagacttgaccccagccgac
ctcgaccctaaacaggtagaagttttgctgcgacaaaaaatcacaggccctgaccaggta
ggtcggcatcccgaaactggggaaccgatttatgtgaaaatcggtgcttatggcccctat
gtccaattgggcgataaaaccgacgaaaaccccaaaccgaaacaagcttctctactcaag
ggtgtcaccccagaaaccgttaccctggaaatggctgttggtctgttggcactaccccgg
acattgggagttcacccagtcacaggcagcaaaatccaagcaagtttgggacgctttggc
ccttatgtggttcatgaccagggtaaggaagggaaagattaccgttcccttaaagctgct
gacaatgtgttgacaattagcctagaacgtgctttagaactattgtccgaaccaaaaaag
ggacgcagttccaccaacagcaagtccaaggcagccttacgcgaattgggcccacatcca
gaggacgcggaaacaattaacatctacgatggcccttatggcccttacatcaagcatggc
aaaactaatgtgagtatcccagaaggtcaaactgtagaagatataactctgactgaggcg
ctcaacttattggcagctaaggcatcgacagcgaaatcgactcgcaaaacgactaaatca
acgacttccaaatctaagtcaactgctaagtcaactgctaagtcaacgacggctgcgaaa
aagaaagtcacagaaggctaa
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