Nostoc sp. ATCC 53789: GJB62_27940
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Entry
GJB62_27940 CDS
T10687
Name
(GenBank) deoxyribodipyrimidine photo-lyase, 8-HDF type
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nost Nostoc sp. ATCC 53789
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nost03400
]
GJB62_27940
Enzymes [BR:
nost01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GJB62_27940
DNA repair and recombination proteins [BR:
nost03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GJB62_27940
Prokaryotic type
GJB62_27940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QHG19412
LinkDB
All DBs
Position
complement(6780755..6782200)
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AA seq
481 aa
AA seq
DB search
MSDLILFWHRRDLRISDNTGLAAAKRQSPKVVGVFCLDPHILERDDVATVRVTYMIGCLQ
KLQERYAQVGSQLLILHADPVQAIPALAKAINAKAVFWNWDVEPYSQERDRTIINALKEK
GIEFLNQNWDQILNSPDEIRTGGNSPYTVYTPFWKNWIIKPKANPVETLQNVEGLTEAEQ
EIAKLAGSVTLPSAKDLGFIWDGELIIAPGEAAAQEKLEEFTYKAITEYQEQRNYPAVDG
TSQLSAALKFGVIGIRTVWQATIEALENSRSEETAVNIRTWQQELAWREFYQHAMYNFPE
LADGAFRDTFKNFPWETNEEHFQAWCEGRTGYPIVDAAMRQMNESGWMHNRCRMIVASFL
TKDLLINPQLGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPVRIFNPASQTQKFDPEG
EYIRQWVSELRSVDTEYLVTGKIPPLERHAVGYPDPIVDHKIQQNQFKLRYQQQKNISGG
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttaattctgttttggcatcggcgcgatttacgcatttctgacaatacgggg
ctggctgcggcaaaacggcaaagtccaaaggtggtgggcgtgttttgcctcgatccacat
attctagaacgggatgatgttgctactgtgagagtaacttatatgattggctgtttgcag
aaactccaagagcgatatgctcaagttggtagccagttgttaatactccacgctgatcct
gtacaagctataccagctttagcaaaggcaataaacgccaaagctgttttttggaattgg
gatgtagaaccttattcacaagaacgcgatcgcaccattataaatgccctcaaagaaaaa
ggtattgagtttcttaatcaaaactgggatcaaatcctcaattccccagatgagatccgc
acaggtggtaacagtccatacacggtttatacccccttctggaaaaattggattatcaaa
ccgaaagcgaacccagttgaaacactgcaaaatgttgagggattaacagaagctgaacaa
gaaattgccaaacttgcgggttctgtgacattaccttcagctaaagatttagggtttatt
tgggatggagaattgattattgcaccaggagaggcggcggcgcaagaaaaattagaagaa
tttacttataaagcgattactgaataccaagaacagcgaaattaccccgcagttgatggc
acatcacaactgagtgcagctttaaaatttggggtaattggcattcgcaccgtttggcaa
gcaaccatagaagcactggaaaatagtcgtagtgaggaaacagcagttaatatccgcaca
tggcaacaggaattagcttggcgggagttttatcaacacgcaatgtataacttcccggaa
ttagccgatggtgctttccgcgacacctttaagaactttccttgggaaactaatgaagaa
catttccaagcttggtgtgaaggaagaactggctaccctattgtggatgcagcaatgcgc
cagatgaatgaaagtggctggatgcacaaccgttgtcgaatgattgttgctagtttcctc
actaaagacttgctaattaatccccaattgggagaaaaatactttatgcagaagttgatt
gatggagatttgtctgctaataatggcggttggcaatggagtgcttctagcggtatggac
cccaaacctgtgcggattttcaatccagccagtcaaacacaaaaattcgatccagaaggg
gaatatattcggcaatgggtatcagaattaaggtctgtagatacagaatatttagttact
gggaaaattccacctttagaacgtcatgctgttggctatcctgacccaattgtggatcat
aaaatacaacaaaaccagtttaaactgcgttatcaacaacaaaaaaatattagtggtggt
gagtaa
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