Nostoc sp. UHCC 0702: JYQ62_03155
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Entry
JYQ62_03155 CDS
T10690
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nosu Nostoc sp. UHCC 0702
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nosu03032
]
JYQ62_03155 (topA)
03400 DNA repair and recombination proteins [BR:
nosu03400
]
JYQ62_03155 (topA)
Enzymes [BR:
nosu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JYQ62_03155 (topA)
DNA replication proteins [BR:
nosu03032
]
Prokaryotic type
DNA Topoisomerases
JYQ62_03155 (topA)
DNA repair and recombination proteins [BR:
nosu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JYQ62_03155 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
DUF6429
Motif
Other DBs
NCBI-ProteinID:
QSJ17877
LinkDB
All DBs
Position
complement(658725..661376)
Genome browser
AA seq
883 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPKDYRVEASMGHVRDLPQSASEIPTAIKAEKWAQLGVNVD
ADFEPVYVVPKDKKKIVTQLKDALKDVDELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITQDAIKKALKNCRNIDEQLVRAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVNKERQRRAFREGTYWDLKAYLEQQKNPFTAQLVTVAGTKVATGSDFDPATGK
ITAGRNVVLLSEADALALKERLADKPWSVTDVEERPVTRKPAPPFTTSTLQQESNRKLRL
SARDTMRVAQNLYEQGYITYMRTDSVHLSDQAIEAARSCVEQLYGKQYLSPQKRQYTTKT
KGAQEAHEAIRPAGSSFRTPQETALGGRELAVYDLIWKRTVACQMADSRQTQITVQLQVE
DAGFRASGKRIDFPGYLRAYVEGSDDPEAALEDQEVILPSLKVGDHPDCTNLEAVGHETQ
PPARYTEATLVKTLESEGIGRPSTYASIIGTIIDKGYAQLVSNALIPTFTAFAVTDLLEK
HFPDIVDPSFTSKMEQTLDDIADGEVAWLPYLREFYLGDKGLETLVREQENQIDANKART
VELENLEAKVRIGKYGPYIEVENGDGVVTASIPKDLTPADLDPKQVEVLLRQKTTGPDQL
GRHPETGEPIYVKIGTYGPYVQLGDKSDENPKPKQASLPKGVTPETVTLDMAVGLLALPR
TLGVHPDTGAKIQASLGRFGPYIVHDQGKEGKDFRSLKASDNVLTISLERALELLSEPKK
GRNSANGKSKAALRELGAHPDDGTPVNIYDGPYGPYIKHDKTNVSIPEGQSVEDVTLSTA
LQLLAAKASTTKSTRKTTKSTSSKTKSTAKSSTTSARKKDAKG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctcgtcatcgtcgaatctccgaccaaagctcgtaccattcgcaactacctg
ccaaaagactatcgggtagaagcgtctatgggtcatgtgcgtgacctaccccaatcggct
agtgaaattcccaccgctatcaaagcagaaaaatgggcgcagcttggggtaaatgtcgat
gccgactttgaaccggtgtatgttgtccccaaagataaaaagaaaattgtcacccaactt
aaagatgccctcaaagatgtagatgaattaatcctggcaacggacgaagaccgggaaggt
gaaagcattagttggcatttataccagttgctcaagccaaaagttcccacaaagcggatg
gtgtttcatgaaattacccaagacgccatcaaaaaagctttgaaaaactgccgtaacatt
gatgaacaactggttcgcgcccaagaaacacgacgtattttagatcgactcgttggctat
actctgtctccgctgttgtggaaaaaaattgcctggggattatccgctgggcgagtccaa
tcagtagccgtgcgacttttggtaaacaaagaacgccaacgccgcgctttccgtgagggt
acatattgggatttgaaagcttatttagagcagcaaaaaaatccctttaccgcccagctg
gtgacagtggcaggtacgaaagtggcaactggcagtgattttgatccagcaactggtaaa
atcaccgctggtcgcaatgtcgtgttgctttcagaagcagatgctttagccctcaaggaa
cgcctggctgataaaccttggagtgtcacagatgtagaggaacgcccagtgacgcgcaaa
cccgcgccaccgtttaccacctcgaccctgcaacaagaatctaaccgcaaactgcggctg
tcagcacgagacacaatgcgggttgctcagaatttgtacgagcaaggatatattacctac
atgcgtacagattcggtgcatttatcggatcaggccatagaagctgcccgcagttgtgta
gaacaactttacgggaaacaatacctcagcccccaaaagaggcaatacaccaccaaaact
aaaggtgcccaagaggcacacgaagcaattcgtccggcaggtagcagtttccgtactccc
caagagactgctttgggcggtcgggaacttgccgtttatgatttgatttggaagcgcacc
gtcgcctgccaaatggctgactctcggcaaactcaaattactgtgcagctgcaagttgaa
gatgcagggttccgtgcttctggcaagcgcatcgattttcccggttatttacgcgcctat
gtcgaaggttcagacgatcctgaggcggcattggaagaccaagaagtgattttgcctagc
ctgaaagttggcgatcatccagattgtaccaacctggaagcagttgggcatgaaacccaa
cccccagctagatacaccgaagcaactctggtaaaaaccctagaaagtgaaggcatcggt
cgtcccagtacctacgccagcatcattggtacgattattgacaaaggttacgcccaattg
gtgagtaacgctctgattcctacttttaccgctttcgccgttaccgacctattggaaaaa
catttccctgacattgttgatcccagttttacctctaaaatggagcaaaccttggatgac
attgccgacggtgaagttgcctggctaccttatttacgggaattttatctgggagacaaa
ggtttagaaactttagtcagagaacaagaaaatcaaattgatgccaataaagctagaact
gtagaactagaaaatttagaggcaaaagtccgtatcgggaaatatgggccttacattgaa
gtcgaaaatggtgacggtgttgttaccgcttccattcccaaagacttgaccccagctgat
cttgaccccaaacaggtagaagtcctactacggcaaaaaaccactggccctgaccaactc
ggtcgccatcccgaaactggcgaaccaatttatgtgaaaatcggcacatatggcccctac
gtccagttgggtgataagtctgatgaaaatcccaaacctaaacaagcttccctacccaaa
ggtgtgactccagaaaccgttaccttggatatggctgttggtcttttggcactacccaga
acattgggagttcatccggacactggtgccaaaatccaagcaagtttaggacgttttggc
ccttacatcgttcatgaccagggtaaggaaggaaaagatttccgctctttgaaagctagt
gataatgttttgacaatttccttagaacgggcattggaattattatctgaaccgaaaaag
ggacgtaactcagctaatggcaagtcaaaagcggccttacgggaattgggcgcacatcct
gatgatggaacacctgtgaatatctacgatggcccttatggcccttacattaagcatgac
aaaactaatgtgagtatcccagaagggcaatcggtagaagatgtaacgctgtctacagca
ctgcaattgttggcagctaaagcatcgacaacgaaatccactcgtaagaccactaaatca
acaagttcgaaaaccaagtcaacggctaagtcatccacgactagtgccagaaaaaaagat
gcaaaaggttag
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