Nostoc sp. UHCC 0702: JYQ62_07750
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Entry
JYQ62_07750 CDS
T10690
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nosu Nostoc sp. UHCC 0702
Pathway
nosu03420
Nucleotide excision repair
nosu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JYQ62_07750 (pcrA)
03430 Mismatch repair
JYQ62_07750 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nosu03400
]
JYQ62_07750 (pcrA)
Enzymes [BR:
nosu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYQ62_07750 (pcrA)
DNA repair and recombination proteins [BR:
nosu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JYQ62_07750 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
JYQ62_07750 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
DEAD
Viral_helicase1
AAA_30
AAA_12
ResIII
Terminase_6N
DUF1978
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QSJ18650
LinkDB
All DBs
Position
1671721..1674039
Genome browser
AA seq
772 aa
AA seq
DB search
MTTSIDFLSHLNPSQRQAVEHYCGPLLVVAGAGSGKTRALTYRIANLILKHRVDPENILA
VTFTNKAAREMKERIQKLFAEQLAMKEHGKRFDLLPEYEQIKLRSQVYKTTIKDLWCGTF
HSLLSRILRFDIEKYQDEKGRRWNRNFSIFDESDVQSLIKEIVTKDLNLDNKKFEPRSVR
YAISNAKNQGFSPQEFEREQPNYRGRVIADVYSRYQDKLAENNGLDFDDLILIPTKLFQQ
NEHVLGYWHRKFHHILVDEYQDTNRTQYDLIRLLVTNGEERKSEWDWQNRSVFVVGDADQ
SIYSFRMADFTILLEFQNDFGDDLPDEDTRTMVKLEENYRSCENILQAANELIENNTQRI
DKILKPTRGAGEQIYCHKADNELEEADFIIRQIRTLEHQNPELNWGSFAILYRTNAQSRP
FEELLVKNQIPYTVVGGIKFYDRKEIKDVLAYLRAIANPADTLSLLRVINTPRRGIGKAT
IENLVNASQQLGTTLWEILSDETSVNTLAGRSAKGVNGFAEMIRKYQEQIATVPVSELLM
GLLEDSGYVQDLQNQGTDESEDRIQNVQELYNATLQFQEENEDVSLTAFLQSAALSSDLD
NLKEGQTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLSDPAALEEERRLCYVGITR
AQERLYLSHARERRLYGSREPAVRSQFLDELPVELLANQSKVRQAYTKSAASNGKGNTTQ
NWQVGDRVLHKSFGLGEITHVFGSDNKISVAIKFAGLGQKIVDPQVAQLQKV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaagcattgacttcctgagtcaccttaaccccagccaacgtcaagccgtggaa
cattactgcggccctttattagttgttgctggcgcaggttccggtaaaacacgagcatta
acttatcgtattgctaacctgattctcaaacaccgtgttgacccagaaaatatcctagcg
gttacgttcaccaacaaagctgcgcgggagatgaaagaacggattcaaaagctgtttgca
gaacaattggcaatgaaagaacacggtaagcgttttgatttgttaccagaatatgaacaa
atcaaattgcgatcgcaagtttacaaaactaccatcaaagacttgtggtgtggcactttc
cacagtttactttctcggattctccgctttgatatcgaaaaatatcaagacgaaaaaggt
cgccgttggaatcgaaatttttctatttttgatgagtctgatgttcaaagcttaatcaaa
gaaattgtaactaaagatttaaacttagacaataaaaaatttgaacctcgttctgtccgc
tacgctattagtaacgctaaaaaccaaggtttttcaccccaagaatttgaacgtgagcaa
cctaactatcgcggacgggtaattgctgatgtttatagtcgctatcaagataaactcgca
gaaaataacggactcgactttgatgatttaattttaataccaactaaattatttcaacaa
aacgaacatgtattaggttattggcatcgcaaatttcatcatattcttgtagatgaatat
caagatactaaccgcactcaatacgacctcatccgtttgttggtgactaacggtgaagaa
agaaagagtgaatgggattggcagaatcgctcagtttttgtcgtgggtgacgcggatcag
tcaatttacagctttagaatggcagactttaccattttgttggaatttcaaaacgatttt
ggtgacgatttgccagatgaagatacccgcacaatggtaaagcttgaggagaactatcgt
tcttgcgaaaatattttgcaagctgctaacgaactgattgaaaataatactcaacggatt
gataaaatcctcaaacccacaaggggggcgggagaacaaatttattgtcataaagcggat
aatgaactagaagaagccgactttataattcgtcagattcgcactttagaacatcaaaat
ccagagttgaattggggtagttttgccatactttatcgtaccaacgcccaatctcgtcct
tttgaagaattgttggtgaagaatcaaataccctatacggttgtggggggaattaagttt
tatgaccgcaaagaaattaaagatgtcctagcttatttaagagcgatcgctaacccagct
gatacactcagtttattgcgagttatcaatacacccaggcgcggtattggtaaagcaact
attgagaacttggtaaatgcatcccaacaattaggtacaacactttgggaaatcctcagc
gatgaaacatcagttaatacattagctgggcgttctgcaaaaggtgtgaatggttttgct
gaaatgattcgcaaatatcaagaacaaatcgcaactgttccagtttcggaattgttaatg
ggacttttagaagattctggttatgtccaagatttgcaaaatcaaggtacagatgaatct
gaagaccggatacaaaacgtccaggaactttacaacgctacactgcaatttcaagaagaa
aatgaagatgtttctttaacagcctttttgcaaagtgctgctttaagttccgatttggat
aacttgaaagaaggacaaacagccgtttctttaatgacattgcacgcctctaaaggtctg
gaattccccgtagtatttttggtgggtttagaacagggattatttcccggctaccgttcg
ctgagtgacccagccgctttagaagaagaacgccgcctgtgttacgtgggaattactcgc
gcccaagaaaggttatatttatcacacgcccgcgaacgtcgcttgtatggatctcgtgaa
ccagcagtgcgatcgcaatttctcgacgaattaccagtagaattattagctaatcaaagc
aaagttcgtcaagcttacaccaaaagcgctgcaagtaatggtaagggaaatacaacacag
aactggcaagtaggcgacagagtattacacaaaagttttggacttggtgaaatcactcac
gtttttggttctgataataagatttctgtggcgattaaattcgctggactggggcaaaaa
attgttgacccccaggtagcacagttgcaaaaagtataa
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