Nostoc sp. UHCC 0702: JYQ62_08445
Help
Entry
JYQ62_08445 CDS
T10690
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element transposase accessory protein TnpB
KO
K07496
putative transposase
Organism
nosu Nostoc sp. UHCC 0702
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JYQ62_08445 (tnpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
RuvC_1
EMG1
Zn_ribbon_10
Motif
Other DBs
NCBI-ProteinID:
QSJ18771
LinkDB
All DBs
Position
1811491..1812699
Genome browser
AA seq
402 aa
AA seq
DB search
MQKAFKVTLILNHNQEVLINKSIGCARFVYNHFLALKQELYLTEQKTLNYNACSQRLTLL
KKEVEWLQEVDKFALQNSLRNLETAYKNFFADFKKIKGRKNVCFPKFKKKHGCKQSYKTN
LTNGNIQVIENRLKLPKLGWVKFHKSQEITGKLVNVTVTRTSSDKYIASILCETEMERHS
IVAQNIGLDLGINSYLVTSNGEVVDNPKYYRTQKRKLRKAHKKLSRTVKGSSNRVKAKIK
LARTYERITNLRDDFLHKLSTRLIKENSIICIEDLRVTNMVKNHKLSLSISDASWSKFVT
MLEYKALWHDRIVQKVGTFYPSSQTCNCCRFVNPLVKDLKLREWSCPQCSSYNLRDNNAA
LNILDEGLRLIAAVGIPEALNACRELVSPGSFQAEIVEAGIA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcgtttaaagttacactcattcttaaccacaaccaagaagtcttaattaat
aagagtattggttgtgcaaggtttgtgtataaccacttcctagcattaaaacaagagtta
tacctcaccgagcaaaaaacgttaaactataatgcttgtagtcagcgactaactctactc
aaaaaagaagtcgaatggctccaagaggtagataagtttgccttacaaaactcacttagg
aatttagagacagcatacaaaaacttttttgctgacttcaagaaaattaaaggtagaaaa
aacgtatgctttcctaaattcaaaaagaagcatgggtgcaagcagtcttacaaaaccaac
ctgactaatggcaacattcaggtaattgagaatcgtttaaagcttcccaagctaggatgg
gtgaagtttcataaatctcaggaaattactggaaaacttgtaaatgttactgtaactcgt
acttcatcagataaatatattgctagtattctgtgtgaaacagagatggagagacactca
atagtggctcaaaatattggtttagacctgggaattaattcttatcttgttacaagcaat
ggtgaagttgtagataatcccaaatattaccggactcaaaaaaggaagttacgtaaagca
cacaaaaaactatcccgcactgtaaaaggtagtagtaatagagtcaaagcaaaaatcaag
ctggctcgtacctacgaacgtattacgaatttgagagatgactttctacacaaactttca
actcgcctaattaaagaaaatagtattatctgtatcgaagatttgcgagtcaccaacatg
gttaagaatcataaattatctttgagtatttcagacgctagttggtctaagttcgttacc
atgctcgaatataaagctttatggcatgacagaattgtgcagaaagttggtacgttttat
ccttcgtctcagacctgtaattgttgtcgttttgttaacccattagttaaagatttaaag
ctgcgcgaatggtcttgtccacaatgtagtagttacaacctaagagacaataatgcagct
ttgaacatattggatgagggattgagattaatagccgccgtgggtatcccggaggctcta
aacgcctgtagagaacttgtaagtcctggatcttttcaggcagagatcgttgaagcagga
atcgcgtga
DBGET
integrated database retrieval system
