Nostoc sp. UHCC 0702: JYQ62_29500
Help
Entry
JYQ62_29500 CDS
T10690
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nosu Nostoc sp. UHCC 0702
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nosu03400
]
JYQ62_29500
DNA repair and recombination proteins [BR:
nosu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JYQ62_29500
Archaeal homologous recombinant proteins
JYQ62_29500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
Rad50_zn_hook
AAA_29
AAA_21
ABC_tran
Pect-lyase_RHGA_epim
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QSJ15891
LinkDB
All DBs
Position
6757148..6760174
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLILKNFLSYRDATLDFRGLHTACICGSNGAGKSSLLEAITWAIWGESRATAEDDV
ILSGAKEVRVDFTFQINEHKYRVIRTRVRGASSVLELQIETPSGFRTLTGKGVRATQDLI
LEHIKLDYDTFINSAYLRQGRADEFMLKRPSERKEILAELLKLNQYDDLEERAKESSRQF
KARAEELERSLESIKIQLQQREVTQAQRAELEAELNQLQQVQAFENIELQSLQVVQHQRQ
NWEQQLSFVRQQYQNLTQDSDRLQQEYSATKTQLSDLEAILNQETGIQNGYAQYQSLQSQ
EEAFAAKFEEYTRATGLRQQKQQQLTKQIHEIERQLQQVQGQLAALQQQEQEIQQTLSKS
GEVEAGLAQLAAARRRVSQLDELQMQVSPLLQQRQNLQSQLHRVEANLKARLEQLQTTEN
QLQRSSGRQPQLQQAVMEVGMQIEQMEKDRVYLQRVQEKGHERRHFIERLQAQQREYERF
LGELDQKLQMLRNPDAICPLCERPLDEHHWNRVVDKTKTEYQDTEGQLWVFREQMAVSDR
EIQLLRQEYREISQKLAAYDALREQRGQLAAQLESTSDAEQQLQQLAAEKQHLERSLQAG
DYAPAQQAELRQLEEYLQKLNYNEQDHALARSEVERWRWAEIKQGQIKDATKRLATLTAR
KPELQTQIAQLQTKIQQEQTDCECAKQIAALDRHIAEIGYSSDQHNNLRMAVRQSQVWQL
RYQQLLSAEQQYPQLQTRLQELESSISDRLTERQKLATQIDTIVQQLGETTNPTEQIQVL
EQQLQTRRRQLDEQIAKLGRLEQLAHQLETLQIQYQQQQQQLQACKQEYRVYQELAQAFG
KNGIQALMIENVLPQLEAETNQLLSRLSANQLHVQFITQKTGRSGKSTKKNAKLIDTLDI
LIADARGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIIDEGFGTQDAEGCD
RLIAAINAIASDFACILTVTHMPHLKEAFQARIEVNKTQQGSQLHLLI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtacaacttatcctgaaaaacttccttagttaccgtgatgcaactttagat
tttcgtggtttgcatacggcttgtatttgtggttccaatggtgcaggtaaatcgtcttta
ctcgaagcaatcacctgggcaatttggggtgaaagccgcgccactgctgaagatgatgtg
attctttccggtgcaaaagaagtccgggtagatttcacctttcaaattaacgaacacaaa
tatcgggtaattcgcacgcgggtgcggggtgctagtagcgtcttggagttgcaaatagaa
acgccctctggctttcgtactctcactggtaagggtgtcagagcaacacaagatttgatt
ttagaacacatcaaactcgattacgatacttttattaattctgcttacctgcgtcaaggg
cgtgcagatgaattcatgctcaagcgccccagtgaacgcaaggaaattttggcggagttg
ttgaaactcaatcaatacgatgatttggaagaacgggcaaaagaatcatcgcgtcagttc
aaagctagggctgaagagttagaacgttctttggaatcgattaaaattcagttgcaacaa
cgtgaggtaacacaggcacaaagagcagaattagaagctgaacttaaccaattacagcag
gtacaagcctttgagaatatcgaattacaaagtttgcaagttgtccaacaccagcgacaa
aattgggaacaacaactcagctttgttaggcaacaataccaaaatttaacccaagatagc
gatcgcctgcaacaagagtattcagcaaccaaaactcagctatcagatttagaagccatc
ttaaatcaggaaactggaattcaaaacggctatgctcaataccaaagtttgcaatctcaa
gaagaagcgtttgcggctaaatttgaagaatatacccgcgccacagggctgcgtcaacaa
aagcaacagcaattaaccaaacaaattcacgaaattgaacgccaactgcaacaagtccaa
ggacaattagcagccttgcagcagcaagagcaagaaattcagcaaactctcagcaaatca
ggtgaagtagaagctggtttagcacaactagccgcagcccgtcgccgtgtgagtcaactc
gatgaactgcaaatgcaagtcagtccgttgttgcaacagcggcaaaatttgcaaagccaa
ctgcatcgagttgaagcgaatttaaaagctaggctagaacaattacaaaccacagagaac
caactgcaacggtcttcaggtcgtcaaccgcaactgcaacaagcagtcatggaagtgggg
atgcagattgaacaaatggaaaaagaccgagtttatctacaacgagtccaagaaaaagga
cacgaaagacgacactttatcgaacgtctacaagcccagcaacgcgagtacgaaaggttt
ttgggagaactcgatcaaaaactgcaaatgcttcgcaaccctgatgctatctgtcctttg
tgtgaacgtcctttagatgaacatcactggaatcgcgtagtggacaaaaccaaaaccgag
taccaagatactgaagggcaattgtgggtgtttcgagaacaaatggcagtttcagatcga
gaaattcagctattgcgccaggaatatcgagaaatatcgcaaaagttagcagcttatgac
gctcttcgggaacaaaggggacaattggcagcacaacttgaatctaccagcgatgctgaa
caacaactacaacaactggctgccgaaaaacaacatttagagcgatcgctacaagctggt
gattatgcacctgctcaacaagctgaactacgacaactagaagaatatctgcaaaaactg
aattataatgaacaagaccatgccctcgcccgcagcgaagtggaacggtggcgatgggca
gaaatcaaacaagggcaaattaaagacgctactaaacgtctggctacattaacagcccga
aaaccagaattacaaacccaaattgctcaattacaaaccaagattcagcaagagcaaact
gattgtgaatgtgctaaacaaatcgctgcccttgatcgccatattgccgaaattgggtat
agttcagaccagcataacaatcttcgcatggctgtgcgtcaaagtcaagtttggcaattg
cgttatcaacagctgttgtcagccgagcagcaatatcctcaactgcaaactcgattacaa
gagttagagtcatctatcagtgacagactcacagagcggcaaaaactcgctactcaaatc
gacactattgtccagcagctaggagaaacaaccaacccaacagagcaaattcaagtttta
gagcagcaactgcaaacacgcaggcgacaactagatgaacaaatagccaagttggggcgt
ttagagcagctggctcaccaactggaaactttgcaaattcaatatcagcaacagcagcaa
caactacaagcttgcaaacaggaatatcgagtttatcaggaattagcgcaggcatttggt
aaaaatggtatccaagctttgatgatcgagaatgtgttgcctcaactggaagccgagaca
aatcaactcttgtcacgattgagtgctaaccagctacatgtgcaatttattactcaaaaa
actggacgcagtggcaaatctaccaagaaaaatgccaagctcatcgataccttagatatt
ttaattgccgatgccagaggcacgcgagcttatgaaacttactctggtggggaagcgttt
agaatcaactttgccattcgtttagccttggcaaaattattggcacaacgggcgggtgcg
gcgttgcaattgttgattatcgatgaaggctttggtacacaagatgcagaaggatgcgat
cgcttgattgcggcgattaatgcgatcgcctctgattttgcctgcattctcacagttact
catatgcctcacctcaaagaagccttccaagcccgtattgaggtgaataaaactcagcaa
ggttcgcagttacatttattaatttag
DBGET
integrated database retrieval system
