Nostoc sp. UHCC 0702: JYQ62_31010
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Entry
JYQ62_31010 CDS
T10690
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nosu Nostoc sp. UHCC 0702
Pathway
nosu03420
Nucleotide excision repair
nosu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JYQ62_31010
03430 Mismatch repair
JYQ62_31010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nosu03400
]
JYQ62_31010
Enzymes [BR:
nosu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYQ62_31010
DNA repair and recombination proteins [BR:
nosu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JYQ62_31010
MMR (mismatch excision repair)
Other MMR factors
JYQ62_31010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
Rv2179c-like
Viral_helicase1
DEAD
DEDDh_C
AAA_11
AAA_30
SpoIIAA-like
ResIII
AAA_12
HeLo
Motif
Other DBs
NCBI-ProteinID:
QSJ16145
LinkDB
All DBs
Position
7099717..7102176
Genome browser
AA seq
819 aa
AA seq
DB search
MSQYKPNLEQQKIINHINGAILVLAPVGSGKTFVLSERVVQAIKSGISAQKILCMTFTNR
AAKEMSERLAQVYPDEFRQITIKTFHSLCATMLRVEARQIGLPADFVVYDDTDCKEVIKE
VFGYAKDKDVQRVFFDITNCKSKAKSSELSSIYPQDKLFAPLGEYTAERVRRYHEILQQR
HALDFADLVFYVRAMFNNQPEIKQRWQERFDFIQVDEVQDTHLSEYEIVRYLVLTSGNIA
MIGDLDQTIYEWRGSEPGNVIERFRQEFQPKIYPLTYNHRATQILLKAASSFAESFNQRQ
TNITPSPNCKPGELIQLYLAKNEFTEAEWIGRQIQKMAKNNQTFAYNRVAVLARTNYRIE
KISSVLEKLGIPCITVEEYQFFNRQEVKDALAYLRLILNPFDIGAMRRMLLRPNRGIGLT
TIQNVIEEGQSCGFKLTDMLLTQTFVDGDPFSNLIAAYTSGSIVVFDVETTGLEVSKDEV
VEIAAIKLVNGTVKAEFHAYIANTVNVGYSEQIHGYSNKFLAANGQPAFKVFHEFFDFAE
GGLLVGHNVGFDIKMVTAHASKVGIKVPKFQWADTWDLANRFLEAESYSLETLANRLSLF
HSPSHKAIDDARTTVELLEALIPAIEHCAAYRQALVYRYGQEFEGLAEQVESWREASQKL
RPVDLLSNLLKESGLYAYYKTDEKRRQNLLKLVTIFQERDNLKLHPNVALRNIVEFTAFA
KNLDQISVQDNQVMMVTVHQSKGLEFDTVFLAGAVEGEFPNYLSLGEEKIEEEKRLFYVA
MTRAKQRLFISAYLQNSGGYAKAPSQFIDSIAKEYLISI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatacaagcctaatttagaacaacaaaaaatcatcaatcatatcaatggagct
attctagttcttgcacctgtaggtagtggtaaaacttttgttctttccgagagagttgtg
caggctataaaaagtggtatttctgctcaaaaaattctctgcatgacatttacaaatcgt
gcggcaaaagaaatgtctgagagattagcacaagtatatccagatgaatttcgccaaatc
actatcaaaacatttcatagcctctgcgctactatgttgcgagttgaggcaagacaaatt
ggcttaccagcagattttgtagtttatgatgatactgattgtaaagaggtaataaaagaa
gtttttggttatgcaaaagacaaagatgttcaaagagttttctttgatattactaattgt
aaaagcaaagctaaatcttctgaattatcttctatttatccacaggataaactgtttgca
cctttaggggaatatactgccgaacgagttagacgttatcatgagattttacaacaacgc
catgctctagattttgcagatctagttttttacgtgcgtgctatgttcaataatcaacca
gaaattaagcagcgttggcaagaacgatttgattttatccaggtagacgaagtacaagat
acccatttatcagagtatgaaattgttcgttatctggtattaactagtggaaatatagcc
atgattggcgatttagaccaaactatttatgaatggcgaggttctgaaccaggtaatgtc
atagagcgatttcgtcaagaatttcaaccaaaaatatatcctctgacttataatcatcga
gctacccaaatattactaaaagctgcttctagtttcgcagaatctttcaaccaaagacaa
acaaatattactccctctcctaattgtaaacctggagaattaattcaactttatttagcg
aaaaatgaatttacagaagcagaatggattggcagacaaattcaaaaaatggcaaaaaat
aaccaaacctttgcttataaccgagtagcagttttggcacgcactaattatcgaatagaa
aaaataagcagtgtcctagaaaagctgggtatcccctgtataaccgtagaagagtaccaa
ttttttaaccgtcaggaagttaaggatgcgctggcttacctgcggctaatattaaatcct
tttgatataggtgcaatgcggcggatgttgctgcgtcctaaccgtgggattggtcttaca
actattcagaatgtaatagaagaaggacaaagttgtgggttcaaactcacggatatgtta
ttaacacaaaccttcgttgatggagacccatttagtaacctcattgctgcttacacatcg
ggttcaatagttgttttcgatgtggaaacaactggactagaagttagtaaggatgaagta
gtagaaattgcagcgataaagttggtaaatggcacagtaaaagcagaatttcatgcatat
attgctaacacggtaaatgtaggatattcagagcaaatacatggctatagtaataagttt
ctggctgcaaatggtcaacctgcttttaaggtgttccatgagttttttgactttgctgag
ggtgggttgttagtaggacataatgttggttttgacatcaaaatggtaacggctcatgct
agtaaagtaggaattaaagttcctaaattccaatgggcagatacctgggatttagcgaac
cgctttctggaggcagaaagctatagcttggaaactttagcaaataggttaagtcttttt
cactcacccagtcataaagctattgatgatgcccgtacaacagtagaattattagaggct
ttaattcctgctatagaacattgcgccgcctatcgccaagctttagtttatcggtatgga
caagagtttgaagggttggccgaacaagtagaatcttggagagaagccagtcaaaaatta
cgacctgttgatttactaagcaatttattaaaagagtcgggactatacgcctattataaa
actgatgaaaagcgccggcaaaatcttttaaagttagttacaattttccaagaacgagat
aatttaaaactccatccaaatgtagcgcttcgcaatattgttgaatttactgcttttgcg
aaaaaccttgaccagatttctgtacaagacaatcaagtcatgatggttacagttcaccag
tcgaaaggtttagaatttgatacagtttttcttgctggtgctgtggaaggtgaatttcca
aattatttaagcctgggagaagagaagattgaagaagaaaaacgcctattctatgtggca
atgactagagcaaaacagcgattgtttatctctgcatatttacaaaactctggaggctat
gcaaaagcaccaagtcagtttattgattccattgcaaaagaatatttgatatcgatctga
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