Nostoc sp. UHCC 0702: JYQ62_31020
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Entry
JYQ62_31020 CDS
T10690
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nosu Nostoc sp. UHCC 0702
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nosu03032
]
JYQ62_31020 (topA)
03400 DNA repair and recombination proteins [BR:
nosu03400
]
JYQ62_31020 (topA)
Enzymes [BR:
nosu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JYQ62_31020 (topA)
DNA replication proteins [BR:
nosu03032
]
Prokaryotic type
DNA Topoisomerases
JYQ62_31020 (topA)
DNA repair and recombination proteins [BR:
nosu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JYQ62_31020 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Mur_ligase_C
Mut7-C
Motif
Other DBs
NCBI-ProteinID:
QSJ16147
LinkDB
All DBs
Position
7104075..7106243
Genome browser
AA seq
722 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGSDWKVLASCGHIRELSDQGEDSLGFSIEGNSIRCNYIP
RDQRAKETIGQLKAAVKQVDEVVLATDPDREGETIAWHLKEVLGLREPKRVVYTEITASA
VRNAIANPRKLDLNLIGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREIQAFVPQDYWSVWVDYAQGFRALYKGTSDGANSAPEPETETNDDAASSTAQIPESK
RVLSEKEATRLVEQARQYPHQVIQVEGKVVNRQPPPAFITSTLQQAAGSKLRFTPDKTML
LAQKLYEAGLITYMRTDSVMLSPEFLKSARQWLEQNDPQNVPEKIASHRSSKTAQEAHEA
IRPTDVFRPSAQLREELPPDEFNLYVMIWKRAIASVCRAAILRKTQIITQSGNLLWKATG
QVIEFYGYARYWNNLSKDTVLPTLQQGQALTVENAAHEQKQTQPPPRYSEPKLVQLMERV
GIGRPSTYAPTVATLKKRDYVQLLKGNLQPTALGLEVDEFLQKALPDLLEAEFTAKMESA
LDAIALGKQSWQQYLTGWNQDYFVPALSKAKTLVVDARNPSATTERKFSSSKTRCPQCNN
FLSKIPSSKVKKKYFLKCTSGCTNVVLFWSDNSKMWEVPRTKASVGENQQKPQPLLTSYS
CPVCKKPLEEYSYIKDGQSKTMLRCSQPQSRQDKKHKDVAYFSTQKGWWSPKFGELSKQP
ER
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcctactagtggttgaatcaccaggaaaagtcaaaaaactcagccaaatt
ctgggtagtgattggaaagttctggctagctgtggtcacatccgagaactgagtgatcaa
ggagaagattcactaggttttagtatagaaggcaacagtatacggtgtaattatatccct
cgtgatcaacgagcaaaagagacaattggacagctcaaagccgcagtcaagcaggttgat
gaagtagttttagcaacagacccagatagggagggagaaacgatcgcttggcatttaaaa
gaagtgctggggttaagagagccaaagcgagtagtatacacagaaattacagcatcggcg
gtgaggaatgcgatcgctaatcccagaaagttagatttaaatttgattggtgcaggatta
tgtcgggattgcctggacaagctggtaggttacaaaggcagcccgttagtctgggcattg
aacaatggggcgaagagtgtaggtagagtgcaaagtgctacattacacctgatttgccag
cgagagagagaaattcaagcttttgtgcctcaggactactggagtgtttgggtggattat
gcccaagggtttcgagctttgtataaagggacatctgatggagcaaactctgccccagag
ccagaaaccgaaactaatgatgatgccgcaagttccactgcacaaataccagaatcaaag
cgagttttatcagaaaaagaagcaacacgcctagtagaacaagcgcggcagtatccacat
caggtaattcaagtggagggtaaagtagttaaccgtcaaccaccaccagcgtttattacc
tcaacactgcaacaagcagcgggttccaagttaagatttacaccagataaaaccatgctc
cttgcccaaaagttgtatgaggcagggctaatcacatatatgcgaactgactcagtaatg
ttgagtcctgagtttttgaagagtgcgcgtcaatggttagagcagaatgatccgcaaaat
gtaccagaaaaaatcgccagtcatcgcagcagcaagacggctcaagaagcccatgaagcg
attcgtcccacagatgtatttcgtccaagtgcccagttacgggaggaactgccacctgat
gaattcaacttgtacgtcatgatttggaaacgagcgatcgcttcggtatgccgtgctgct
atcctacgtaaaacccaaatcataactcagtctggtaatttgctatggaaagctacagga
caggtaattgaattttatggttatgcacggtattggaataatctgagtaaggatacagtt
ttacccacattgcagcagggacaggctctaactgtggaaaatgcggcacatgagcagaag
cagacacaaccgccgccacgttacagtgaaccgaaactggtgcaactaatggaacgcgtg
ggtatcggtcgccccagtacctatgctccgactgtcgccaccctcaaaaaacgggattat
gtgcagctgttaaaggggaacttacagccgacagcactggggttagaagtggatgagttt
ttgcagaaggctttacccgatttactggaggcagaatttacagctaagatggagtctgcc
ctagatgcgatcgctctgggaaaacaatcttggcagcaatatctaactggctggaatcaa
gattactttgtaccagccttatcaaaagctaaaactttggtagtagatgccagaaatccg
tctgctacaacagagcgcaaattttcaagttctaaaactcgctgcccacagtgtaataac
tttctctccaaaatacctagcagcaaagtcaagaaaaaatatttcctcaaatgcacaagt
ggttgcaccaatgtagtgctgttttggagcgacaatagcaaaatgtgggaagtacctcga
actaaagcatctgttggtgaaaatcaacaaaagccacaaccattgttaacttcatattcc
tgcccagtgtgtaaaaaaccattggaagagtacagctacatcaaagacgggcagagtaaa
actatgcttcggtgttctcaaccccaatctcgccaggataagaaacataaagatgtggct
tatttcagcacacaaaaagggtggtggagtccaaagtttggtgagttgagtaaacagcca
gagcgctaa
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